RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 RIMS3Q9UJD0 308 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 TRBV5-4A0A0C4DH59 114 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 GFYI3L273 518 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 APOC1P02654 83 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 CSTBP04080 98 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 F8A1P23610 371 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 TEAD1P28347 426 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 BCL6P41182 706 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 GPR4P46093 362 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC3A1Q07837 685 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 CCSMST1Q4G0I0 132 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 C1orf94Q6P1W5 598 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 RASSF6Q6ZTQ3 369 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 UTS2BQ765I0 119 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 PDSS2Q86YH6 399 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 LRRC17Q8N6Y2 441 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 CCDC115Q96NT0 180 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 SNTG1Q9NSN8 517 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 NKX1-2Q9UD57 310 aaPredicted RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 SAGE2PA6NJ88 616 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 TAPBPO15533 448 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 ENTPD6O75354 484 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 MAGEA12P43365 314 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 CBX5P45973 191 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 PRPS1P60891 318 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 CHAF1BQ13112 559 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 MEP1AQ16819 746 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 C3orf38Q5JPI3 329 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 ABHD17CQ6PCB6 329 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 TSSK4Q6SA08 328 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 NRMQ8IXM6 262 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF740Q8NDX6 193 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 OR2T4Q8NH00 348 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 PROKR1Q8TCW9 393 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 NKD1Q969G9 470 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 LINC00615Q96LM1 132 aaPredicted RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 CLCC1Q96S66 551 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 LMF2Q9BU23 707 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 MROQ9BYG7 248 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 PRDM9Q9NQV7 894 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF222Q9UK12 451 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 MCTS1Q9ULC4 181 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 FKBP7Q9Y680 259 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 A0A075B6Q4 140 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 PLOD3O60568 738 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 GALR3O60755 368 aaPredicted RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 CTNSO60931 367 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 ABCB7O75027 752 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 GATBO75879 557 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 IL9P15248 144 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 MLLT10P55197 1068 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 RAB25P57735 213 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 RAB15P59190 212 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 PSPHP78330 225 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 PITPNAQ00169 270 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 TLE3Q04726 772 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 Q7L0L9 218 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 ERI1Q8IV48 349 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 ENDOVQ8N8Q3 282 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 OR8J2Q8NGG1 315 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 FRS2Q8WU20 508 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 PMM1Q92871 262 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC7A6OSQ96CW6 309 aaPredicted RBP8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 EDEM2Q9BV94 578 aa8.88□□□□□ -0.99
CLTCL1-208ENST00000615606 M0R3H8 397 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TFECO14948 347 aaPredicted RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 NDUFB2O95178 105 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 NR4A1P22736 598 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 GDF1P27539 372 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 UBE2NP61088 152 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 CSNK2A1P68400 391 aaPredicted RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 ZP2Q05996 745 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 SFT2D3Q587I9 215 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 HMBOX1Q6NT76 420 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 DTWD1Q8N5C7 304 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 PJA1Q8NG27 643 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 NANOS1Q8WY41 292 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 RSC1A1Q92681 617 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 HDAC2Q92769 488 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 FBXL20Q96IG2 436 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TMEM181Q9P2C4 612 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 SPTY2D1-AS1A0A0U1RR47 76 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC22A1O15245 554 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF749O43361 778 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 DHFRP00374 187 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 CEACAM5P06731 702 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC35E2P0CK97 266 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 GLB1P16278 677 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 RBPJQ06330 500 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 NPRL3Q12980 569 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 GPR19Q15760 415 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 EEF1A1P5Q5VTE0 462 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 PAPD4Q6PIY7 484 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 BPHLQ86WA6 291 aaPredicted RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF101Q8IZC7 436 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 DNAJA3Q96EY1 480 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 SRA1Q9HD15 236 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 LYRM4Q9HD34 91 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms