RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GPR157Q5UAW9 335 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 WSCD1Q658N2 575 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 BRAT1Q6PJG6 821 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SERPINA12Q8IW75 414 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 IQCF1Q8N6M8 205 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 TMIGD2Q96BF3 282 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 UHRF1Q96T88 793 aaPredicted RBP8.34□□□□□ -1.07
TTC28-208ENST00000612946 FEVQ99581 238 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 UBQLN3Q9H347 655 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 FN3KRPQ9HA64 309 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ATAD5Q96QE3 1844 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SNRPGP15A8MWD9 76 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 BCHEP06276 602 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 AKR1C4P17516 323 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SHMT1P34896 483 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 THPOP40225 353 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SEZ6Q53EL9 994 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ENPP6Q6UWR7 440 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PDZD3Q86UT5 571 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 FUNDC1Q8IVP5 155 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 JOSD2Q8TAC2 188 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PHYHIPLQ96FC7 376 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 P2RY13Q9BPV8 354 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PSMD9O00233 223 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 FANCGO15287 622 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 CXCR1P25024 350 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 MTNR1BP49286 362 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ATG4CQ96DT6 458 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 TMEM74Q96NL1 305 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 METTL15A6NJ78 407 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ARNTLO00327 626 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SYN1P17600 705 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ETV4P43268 484 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PRPS1P60891 318 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 RAB33AQ14088 237 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 FCN2Q15485 313 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 MOGAT2Q3SYC2 334 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PXDC1Q5TGL8 231 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 LYRM7Q5U5X0 104 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 P4HA3Q7Z4N8 544 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 OR2T4Q8NH00 348 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 OR5W2Q8NH69 310 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 A0A1W2PQ45 241 aaPredicted RBP8.34□□□□□ -1.07
TTC28-208ENST00000612946 A0A1W2PQY0 241 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 OR51F1A6NGY5 319 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ZNF726A6NNF4 738 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 TMEM183BQ1AE95 376 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 LRIT3Q3SXY7 679 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 NTPCRQ9BSD7 190 aaKnown RBP8.34□□□□□ -1.07
TTC28-208ENST00000612946 OARD1Q9Y530 152 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 UBR2Q8IWV8 1755 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 M0R143 59 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 IRAK2O43187 625 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 POMCP01189 267 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PRNPP04156 253 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 KCNJ5P48544 419 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PRKCZQ05513 592 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 GUK1Q16774 197 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 LHFPL5Q8TAF8 219 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ZNF566Q969W8 418 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 KAZALD1Q96I82 304 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 TMEM233B4DJY2 109 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SERINC3Q13530 473 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 GPR50Q13585 617 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 MINDY4Q4G0A6 757 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ADGRF1Q5T601 910 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SLC35D2Q76EJ3 337 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 OR5D16Q8NGK9 328 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PRAP1Q96NZ9 151 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 UHRF2Q96PU4 802 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 HIPK2Q9H2X6 1198 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 HRH4Q9H3N8 390 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.34□□□□□ -1.07
TTC28-208ENST00000612946 ENPP4Q9Y6X5 453 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 DOPEY2Q9Y3R5 2298 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 TRDV1A0A1B0GX56 115 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SPATA31C2B4DYI2 1134 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 GPR89AB7ZAQ6 455 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 GPR89BP0CG08 455 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 ADH7P40394 386 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 F2RL1P55085 397 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SF3B4Q15427 424 aaKnown RBP eCLIP8.34□□□□□ -1.072e-6■■□□□ 13.9
TTC28-208ENST00000612946 INAVAQ3KP66 663 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 KLBQ86Z14 1044 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 OR13C3Q8NGS6 347 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 OR5P2Q8WZ92 322 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 BMFQ96LC9 184 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 C20orf85Q9H1P6 137 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 POP4O95707 220 aaKnown RBP8.34□□□□□ -1.08
TTC28-208ENST00000612946 PIPP12273 146 aaPredicted RBP8.34□□□□□ -1.08
TTC28-208ENST00000612946 HNF1AP20823 631 aa8.34□□□□□ -1.08
TTC28-208ENST00000612946 ZNF679Q8IYX0 411 aa8.34□□□□□ -1.08
TTC28-208ENST00000612946 YIPF5Q969M3 257 aa8.34□□□□□ -1.08
TTC28-208ENST00000612946 CMTM3Q96MX0 182 aa8.34□□□□□ -1.08
TTC28-208ENST00000612946 ZCCHC4Q9H5U6 513 aa8.34□□□□□ -1.08
TTC28-208ENST00000612946 SLC17A6Q9P2U8 582 aa8.34□□□□□ -1.08
TTC28-208ENST00000612946 NOX1Q9Y5S8 564 aa8.34□□□□□ -1.08
TTC28-208ENST00000612946 NPFFR2Q9Y5X5 522 aa8.34□□□□□ -1.08
TTC28-208ENST00000612946 MAST2Q6P0Q8 1798 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms