RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 GUCY2DQ02846 1103 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 STX5Q13190 355 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 EFR3AQ14156 821 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 BEX5Q5H9J7 111 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 METTL2BQ6P1Q9 378 aaKnown RBP21.03■□□□□ 0.96
MMP28-203ENST00000612672 ZDHHC24Q6UX98 284 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 SH2D5Q6ZV89 423 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 GBP7Q8N8V2 638 aaPredicted RBP21.03■□□□□ 0.96
MMP28-203ENST00000612672 OR7G2Q8NG99 324 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 FBXO25Q8TCJ0 367 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 TMEM204Q9BSN7 226 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 PPP4R1LQ9P1A2 415 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 RNF14Q9UBS8 474 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 CLEC4AQ9UMR7 237 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 ZNF175Q9Y473 711 aa21.03■□□□□ 0.96
MMP28-203ENST00000612672 CCDC189A1A4V9 331 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 FADS1O60427 444 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 STX2P32856 288 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 PNLIPRP2P54317 469 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 NAB1Q13506 487 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 STAC2Q6ZMT1 411 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 GGNQ86UU5 652 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 SLC44A2Q8IWA5 706 aaPredicted RBP21.02■□□□□ 0.96
MMP28-203ENST00000612672 PLPPR2Q96GM1 343 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 ELOVL6Q9H5J4 265 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 ZNF780BQ9Y6R6 833 aa21.02■□□□□ 0.96
MMP28-203ENST00000612672 RNF212BA8MTL3 300 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 HS3ST1O14792 307 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 GUCY1B2O75343 617 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 IL3P08700 152 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 RPS17P08708 135 aaKnown RBP21.01■□□□□ 0.95
MMP28-203ENST00000612672 CHN1P15882 459 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 PLTPP55058 493 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 RAE1P78406 368 aaKnown RBP21.01■□□□□ 0.95
MMP28-203ENST00000612672 PSG6Q00889 435 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 DMTNQ08495 405 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 ZNF844Q08AG5 666 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 PRSS53Q2L4Q9 553 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 FAM214BQ7L5A3 538 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 METTL25Q8N6Q8 603 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 ZNF611Q8N823 705 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 LILRB1Q8NHL6 650 aaPredicted RBP21.01■□□□□ 0.95
MMP28-203ENST00000612672 EXOSC8Q96B26 276 aaKnown RBP21.01■□□□□ 0.95
MMP28-203ENST00000612672 VPS11Q9H270 941 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 PFDN4Q9NQP4 134 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 XPR1Q9UBH6 696 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 FREM1Q5H8C1 2179 aa21.01■□□□□ 0.95
MMP28-203ENST00000612672 FAM187AA6NFU0 413 aa21■□□□□ 0.95
MMP28-203ENST00000612672 GNG11P61952 73 aa21■□□□□ 0.95
MMP28-203ENST00000612672 HEPHL1Q6MZM0 1159 aa21■□□□□ 0.95
MMP28-203ENST00000612672 HMBOX1Q6NT76 420 aa21■□□□□ 0.95
MMP28-203ENST00000612672 CCDC91Q7Z6B0 441 aa21■□□□□ 0.95
MMP28-203ENST00000612672 MILR1Q7Z6M3 343 aa21■□□□□ 0.95
MMP28-203ENST00000612672 WFDC8Q8IUA0 241 aa21■□□□□ 0.95
MMP28-203ENST00000612672 RAB3IL1Q8TBN0 382 aa21■□□□□ 0.95
MMP28-203ENST00000612672 SELENOMQ8WWX9 145 aa21■□□□□ 0.95
MMP28-203ENST00000612672 NPAS1Q99742 590 aa21■□□□□ 0.95
MMP28-203ENST00000612672 NAPGQ99747 312 aaPredicted RBP21■□□□□ 0.95
MMP28-203ENST00000612672 CXorf56Q9H5V9 222 aa21■□□□□ 0.95
MMP28-203ENST00000612672 PSME2Q9UL46 239 aa21■□□□□ 0.95
MMP28-203ENST00000612672 CADP27708 2225 aa21■□□□□ 0.95
MMP28-203ENST00000612672 STX16-NPEPL1H3BU86 382 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 STX16O14662 325 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 CDH13P55290 713 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 C2orf54Q08AI8 447 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 CLEC12BQ2HXU8 276 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 C10orf62Q5T681 223 aaPredicted RBP20.99■□□□□ 0.95
MMP28-203ENST00000612672 KLC3Q6P597 504 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 UHMK1Q8TAS1 419 aaKnown RBP20.99■□□□□ 0.95
MMP28-203ENST00000612672 ZNF483Q8TF39 744 aaPredicted RBP20.99■□□□□ 0.95
MMP28-203ENST00000612672 AKAP1Q92667 903 aaKnown RBP eCLIP20.99■□□□□ 0.95
MMP28-203ENST00000612672 C1GALT1C1Q96EU7 318 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 FAIM2Q9BWQ8 316 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 LAMP3Q9UQV4 416 aa20.99■□□□□ 0.95
MMP28-203ENST00000612672 SOD3P08294 240 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 TYK2P29597 1187 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 KRT20P35900 424 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 PAFAH1B1P43034 410 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 SERPINB8P50452 374 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 EEFSECP57772 596 aaKnown RBP20.98■□□□□ 0.95
MMP28-203ENST00000612672 TRA2BP62995 288 aaKnown RBP20.98■□□□□ 0.95
MMP28-203ENST00000612672 VEZF1Q14119 521 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 UAP1Q16222 522 aaPredicted RBP20.98■□□□□ 0.95
MMP28-203ENST00000612672 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.98■□□□□ 0.95
MMP28-203ENST00000612672 TMEM44Q2T9K0 475 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 NEUROG1Q92886 237 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 MTBPQ96DY7 904 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 BRF2Q9HAW0 419 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 PLSCR4Q9NRQ2 329 aa20.98■□□□□ 0.95
MMP28-203ENST00000612672 OVOL3O00110 214 aa20.97■□□□□ 0.95
MMP28-203ENST00000612672 GMFGO60234 142 aa20.97■□□□□ 0.95
MMP28-203ENST00000612672 BCAS2O75934 225 aaPredicted RBP20.97■□□□□ 0.95
MMP28-203ENST00000612672 ESRRBO95718 433 aa20.97■□□□□ 0.95
MMP28-203ENST00000612672 SBK3P0C264 359 aa20.97■□□□□ 0.95
MMP28-203ENST00000612672 MAGEA12P43365 314 aa20.97■□□□□ 0.95
MMP28-203ENST00000612672 ZNF155Q12901 538 aaPredicted RBP20.97■□□□□ 0.95
MMP28-203ENST00000612672 FGFBP1Q14512 234 aa20.97■□□□□ 0.95
MMP28-203ENST00000612672 ERCC6LQ2NKX8 1250 aa20.97■□□□□ 0.95
MMP28-203ENST00000612672 CTU2Q2VPK5 515 aaKnown RBP20.97■□□□□ 0.95
MMP28-203ENST00000612672 SH2D4BQ5SQS7 431 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms