RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CRHP06850 196 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 PEPDP12955 493 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 TCEA1P23193 301 aaKnown RBP16.07■□□□□ 0.16
SSBP1-215ENST00000612337 NCBP2P52298 156 aaKnown RBP eCLIP16.07■□□□□ 0.162e-8■□□□□ 9.2
SSBP1-215ENST00000612337 C2orf80Q0P641 193 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 POU4F3Q15319 338 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 PRSS53Q2L4Q9 553 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 CYP27C1Q4G0S4 372 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 SPDYAQ5MJ70 313 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 OR2A2Q6IF42 318 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 FAM71E1Q6IPT2 247 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 P4HA3Q7Z4N8 544 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 CNPY4Q8N129 248 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 KIF18AQ8NI77 898 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.07■□□□□ 0.167e-10■■□□□ 14.1
SSBP1-215ENST00000612337 CCDC126Q96EE4 140 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 DSN1Q9H410 356 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 MID1IP1Q9NPA3 183 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 TAS2R7Q9NYW3 318 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 PSMC3IPQ9P2W1 217 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-215ENST00000612337 NDRG3Q9UGV2 375 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 ABCG2Q9UNQ0 655 aa16.07■□□□□ 0.16
SSBP1-215ENST00000612337 C19orf53Q9UNZ5 99 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-215ENST00000612337 WBP11Q9Y2W2 641 aaKnown RBP16.07■□□□□ 0.16
SSBP1-215ENST00000612337 A0A1W2PPR1 153 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 UBFD1O14562 309 aaKnown RBP16.06■□□□□ 0.16
SSBP1-215ENST00000612337 CASKO14936 926 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 SCO2O43819 266 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 PSMG1O95456 288 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 JUNP05412 331 aaKnown RBP16.06■□□□□ 0.16
SSBP1-215ENST00000612337 PYGBP11216 843 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 HOXB4P17483 251 aaPredicted RBP16.06■□□□□ 0.16
SSBP1-215ENST00000612337 MC3RP41968 323 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 PCYT1AP49585 367 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 FOXA1P55317 472 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 GANABQ14697 944 aaKnown RBP16.06■□□□□ 0.16
SSBP1-215ENST00000612337 TMEM107Q6UX40 140 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 CHMP1BQ7LBR1 199 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 MEIOBQ8N635 442 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 OR2M3Q8NG83 312 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 CDC26Q8NHZ8 85 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 FAM76AQ8TAV0 307 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 MZB1Q8WU39 189 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 GSX1Q9H4S2 264 aaPredicted RBP16.06■□□□□ 0.16
SSBP1-215ENST00000612337 NEUROD4Q9HD90 331 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 MYNNQ9NPC7 610 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 MIEF1Q9NQG6 463 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 SDHAF3Q9NRP4 125 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 DCDC2Q9UHG0 476 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 TESMINQ9Y4I5 508 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 DNHD1Q96M86 4753 aa16.06■□□□□ 0.16
SSBP1-215ENST00000612337 SLC22A20A6NK97 555 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 HK1P19367 917 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 CD53P19397 219 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 HOXC12P31275 282 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 CPOXP36551 454 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 EEFSECP57772 596 aaKnown RBP16.05■□□□□ 0.16
SSBP1-215ENST00000612337 NAA20P61599 178 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 DECR1Q16698 335 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 IMPG1Q17R60 797 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 SH2D4BQ5SQS7 431 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 RAET1LQ5VY80 246 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 TRIM46Q7Z4K8 759 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 IFT20Q8IY31 132 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 UBQLNLQ8IYU4 475 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 OR2L13Q8N349 312 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 CCNYL1Q8N7R7 359 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 WFDC11Q8NEX6 87 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 STARD4Q96DR4 205 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 GLIPR2Q9H4G4 154 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 Q9N2J8 555 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 BEX4Q9NWD9 120 aaPredicted RBP16.05■□□□□ 0.16
SSBP1-215ENST00000612337 EMCNQ9ULC0 261 aa16.05■□□□□ 0.16
SSBP1-215ENST00000612337 EIF3LQ9Y262 564 aaKnown RBP16.05■□□□□ 0.16
SSBP1-215ENST00000612337 NSD1Q96L73 2696 aaPredicted RBP16.05■□□□□ 0.16
SSBP1-215ENST00000612337 PCNX3Q9H6A9 2034 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 G3V2L1 256 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 H3BQF6 201 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 LINC01387J3KSC0 135 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 UPK1AO00322 258 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 SMNDC1O75940 238 aaKnown RBP eCLIP16.04■□□□□ 0.16
SSBP1-215ENST00000612337 IL33O95760 270 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 MYL2P10916 166 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 NTSP30990 170 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 CLDN15P56746 228 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 FAM27E3Q08E93 113 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 SLC29A2Q14542 456 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 VWA1Q6PCB0 445 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 ZYG11AQ6WRX3 759 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 CNEP1R1Q8N9A8 125 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 ELP4Q96EB1 424 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 AMDHD1Q96NU7 426 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 PTGES2Q9H7Z7 377 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 DDX18Q9NVP1 670 aaKnown RBP16.04■□□□□ 0.16
SSBP1-215ENST00000612337 FAM120CQ9NX05 1096 aaKnown RBP16.04■□□□□ 0.16
SSBP1-215ENST00000612337 FLRT3Q9NZU0 649 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 MED11Q9P086 117 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 MRTO4Q9UKD2 239 aaKnown RBP16.04■□□□□ 0.16
SSBP1-215ENST00000612337 ZNF337Q9Y3M9 751 aa16.04■□□□□ 0.16
SSBP1-215ENST00000612337 POLR3HQ9Y535 204 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms