RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	ERI3	O43414	337 aa	Known RBP	13	□□□□□ -0.33
COPS7B-223	ENST00000611614	GUCY1B2	O75343	617 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	STATH	P02808	62 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	MAG	P20916	626 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	RPS5	P46782	204 aa	Known RBP	13	□□□□□ -0.33
COPS7B-223	ENST00000611614	FASLG	P48023	281 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	MAZ	P56270	477 aa	Known RBP	13	□□□□□ -0.33
COPS7B-223	ENST00000611614	SNRPG	P62308	76 aa	Known RBP	13	□□□□□ -0.33
COPS7B-223	ENST00000611614	TGM3	Q08188	693 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	SLAMF1	Q13291	335 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	DEFB133	Q30KQ1	61 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	ATAD3C	Q5T2N8	411 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	PMS2CL	Q68D20	193 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	MRM1	Q6IN84	353 aa	Known RBP	13	□□□□□ -0.33
COPS7B-223	ENST00000611614	ABHD17C	Q6PCB6	329 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	TMEM64	Q6YI46	380 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	ATCAY	Q86WG3	371 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	ARL14	Q8N4G2	192 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	BBS10	Q8TAM1	723 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	SFXN5	Q8TD22	340 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	WFDC6	Q9BQY6	131 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	FUZ	Q9BT04	418 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	SARG	Q9BW04	601 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	IRF2BPL	Q9H1B7	796 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	ERVMER34-1	Q9H9K5	563 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	PRDM7	Q9NQW5	492 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	NDOR1	Q9UHB4	597 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	N6AMT1	Q9Y5N5	214 aa		13	□□□□□ -0.33
COPS7B-223	ENST00000611614	CCDC88C	Q9P219	2028 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	C4orf51	C9J302	202 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	PRKRA	O75569	313 aa	Known RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	PIAS2	O75928	621 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	TYRP1	P17643	537 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	HIST1H1T	P22492	207 aa	Predicted RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ANXA11	P50995	505 aa	Known RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ARFIP1	P53367	373 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	STXBP1	P61764	594 aa	Known RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	RHAG	Q02094	409 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	RGS1	Q08116	209 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	GPR50	Q13585	617 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	TST	Q16762	297 aa	Known RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	C6orf183	Q5T699	404 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	PLAG1	Q6DJT9	500 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	PGBD2	Q6P3X8	592 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	FIGLA	Q6QHK4	219 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	RAB43	Q86YS6	212 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	MFSD9	Q8NBP5	474 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	SIMC1	Q8NDZ2	872 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	OR8K5	Q8NH50	307 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	WDFY2	Q96P53	400 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	MACROD1	Q9BQ69	325 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	SPATA5L1	Q9BVQ7	753 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	TAPBPL	Q9BX59	468 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	RNF167	Q9H6Y7	350 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	BCL2L10	Q9HD36	194 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	C11orf16	Q9NQ32	467 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	CAB39	Q9Y376	341 aa	Predicted RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	GOLGA4	Q13439	2230 aa	Known RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614		A0A1W2PR48	441 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ANKRD34B	A5PLL1	514 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	OR5K3	A6NET4	321 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	GLOD5	A6NK44	160 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	UBXN7	O94888	489 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	HSMCR30	P0CW71	290 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ENDOU	P21128	410 aa	Known RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ATP5A1	P25705	553 aa	Known RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	CRISP3	P54108	245 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ZFP69	Q49AA0	526 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	BHLHB9	Q6PI77	547 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	NANOGNB	Q7Z5D8	188 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	PAQR7	Q86WK9	346 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614		Q8N9G6	341 aa	Predicted RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ACOT4	Q8N9L9	421 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	OR2L5	Q8NG80	312 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	POLR2J3	Q9H1A7	115 aa	Known RBP	12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	SLC25A19	Q9HC21	320 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	A4GNT	Q9UNA3	340 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614	ATG4B	Q9Y4P1	393 aa		12.99	□□□□□ -0.33
COPS7B-223	ENST00000611614		A0A0J9YY10	115 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SLC35F4	A4IF30	521 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	PGRMC2	O15173	223 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SCO2	O43819	266 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	ENTPD6	O75354	484 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	ERAL1	O75616	437 aa	Known RBP	12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SLC35G6	P0C7Q6	338 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	HOXB3	P14651	431 aa	Predicted RBP	12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	XK	P51811	444 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	PRKAG1	P54619	331 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SRSF5	Q13243	272 aa	Known RBP	12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	GNA13	Q14344	377 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	GPR19	Q15760	415 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SOWAHC	Q53LP3	525 aa	Predicted RBP	12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	MEDAG	Q5VYS4	303 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	C12orf73	Q69YU5	71 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	OR8H2	Q8N162	312 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	RERG	Q96A58	199 aa	Predicted RBP	12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	IL4I1	Q96RQ9	567 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	TBC1D24	Q9ULP9	559 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614		A0A1W2PRQ8	180 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms