RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 C8orf4Q9NR00 106 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 PAQR5Q9NXK6 330 aaPredicted RBP6.59□□□□□ -1.35
CBWD1-219ENST00000611457 TRPC4Q9UBN4 977 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 UNC13CQ8NB66 2214 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 PHGDHO43175 533 aaKnown RBP6.59□□□□□ -1.35
CBWD1-219ENST00000611457 SCN2BO60939 215 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 WDPCPO95876 746 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 TBXA2RP21731 343 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 ME2P23368 584 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 ZFP36L2P47974 494 aaKnown RBP6.59□□□□□ -1.35
CBWD1-219ENST00000611457 SLC1A6P48664 564 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 NUDT2P50583 147 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 BMXP51813 675 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 CLDN8P56748 225 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 RBPJQ06330 500 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 ELOAQ14241 798 aaKnown RBP6.59□□□□□ -1.35
CBWD1-219ENST00000611457 HEPACAMQ14CZ8 416 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 TESK1Q15569 626 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 KCNJ8Q15842 424 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 NRF1Q16656 503 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 C1QL3Q5VWW1 255 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 C8orf82Q6P1X6 216 aaPredicted RBP6.59□□□□□ -1.35
CBWD1-219ENST00000611457 TTC33Q6PID6 262 aaPredicted RBP6.59□□□□□ -1.35
CBWD1-219ENST00000611457 PM20D2Q8IYS1 436 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 TAGAPQ8N103 731 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 ADPRHL1Q8NDY3 354 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 MARK4Q96L34 752 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 ZNF597Q96LX8 424 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 CSF3RQ99062 836 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 AMBRA1Q9C0C7 1298 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 C20orf27Q9GZN8 174 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 IFT52Q9Y366 437 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 RAP2CQ9Y3L5 183 aa6.59□□□□□ -1.35
CBWD1-219ENST00000611457 AIM2O14862 343 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 RGS14O43566 566 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 FGF17O60258 216 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 NPPAP01160 153 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 EPXP11678 715 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 COX7A2P14406 83 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 PSMA4P25789 261 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 DIO3P55073 304 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ABCE1P61221 599 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 TLE1Q04724 770 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 SLAMF1Q13291 335 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ERV3-1Q14264 604 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ZNF460Q14592 562 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 DEFB110Q30KQ9 67 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 SMUG1Q53HV7 270 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 LAPTM4BQ86VI4 370 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 EFCAB3Q8N7B9 438 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 BHLHE22Q8NFJ8 381 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 HPS1Q92902 700 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 NCLNQ969V3 563 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 SNRNP40Q96DI7 357 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 TSNARE1Q96NA8 513 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 CDRT15Q96T59 188 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 PKP2Q99959 881 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 MOV10Q9HCE1 1003 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 NOX1Q9Y5S8 564 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ERI3O43414 337 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 BCL10O95999 233 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 SRD5A2P31213 254 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 OR1D4P47884 311 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 RPS13P62277 151 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 CRYZQ08257 329 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 NSUN5P2Q63ZY6 315 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 CARM1Q86X55 608 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 LACC1Q8IV20 430 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 TMEM151BQ8IW70 566 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 BEST3Q8N1M1 668 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 RP9Q8TA86 221 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ITLN2Q8WWU7 325 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 OR5P2Q8WZ92 322 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ATG10Q9H0Y0 220 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 TP63Q9H3D4 680 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 NOL11Q9H8H0 719 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 NEUROD4Q9HD90 331 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 SIRT3Q9NTG7 399 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 OLAHQ9NV23 265 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 C1orf109Q9NX04 203 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ZIM2Q9NZV7 527 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 CLCF1Q9UBD9 225 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 KLHL3Q9UH77 587 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 PSME2Q9UL46 239 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 RBMX2Q9Y388 322 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 RNF11Q9Y3C5 154 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 DNAH14Q0VDD8 3507 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 DYRK3O43781 588 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 ZNF26P17031 533 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 CCNA2P20248 432 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 CERS1P27544 350 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 PSMD4P55036 377 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 TRAP1Q12931 704 aaKnown RBP6.58□□□□□ -1.36
CBWD1-219ENST00000611457 OR1C1Q15619 314 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 VWA2Q5GFL6 755 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 SNAP47Q5SQN1 464 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 LRIF1Q5T3J3 769 aa6.58□□□□□ -1.36
CBWD1-219ENST00000611457 GPR107Q5VW38 600 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms