RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 MRPS22P82650 360 aaKnown RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 PMPCAQ10713 525 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 CDSNQ15517 529 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 SMU1Q2TAY7 513 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 SPDYE7PQ495Y7 208 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 SP5Q6BEB4 398 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 TMEM81Q6P7N7 255 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 GALNT10Q86SR1 603 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 TRIM42Q8IWZ5 723 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 KIRREL3Q8IZU9 778 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 CDRT4Q8N9R6 151 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 WDSUB1Q8N9V3 476 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 FAM83FQ8NEG4 500 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 OR10Q1Q8NGQ4 319 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 PHF10Q8WUB8 498 aaKnown RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 FAM120BQ96EK7 910 aaKnown RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 GIMAP5Q96F15 307 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 MS4A4EQ96PG1 132 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 DUSP26Q9BV47 211 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 DPY30Q9C005 99 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 SIRT3Q9NTG7 399 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 ZCCHC3Q9NUD5 404 aaKnown RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 ARGLU1Q9NWB6 273 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 COQ3Q9NZJ6 369 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 FLRT3Q9NZU0 649 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 MRTO4Q9UKD2 239 aaKnown RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 WIF1Q9Y5W5 379 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 GOLGA8QA0A0J9YX86 632 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 GOLGA8OA6NCC3 632 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 C17orf51A8MQB3 221 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 GOLGA8NF8WBI6 632 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 SNNO75324 88 aaPredicted RBP13.14□□□□□ -0.31
TUBE1-208ENST00000604743 CBR3O75828 277 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 KCNH1O95259 989 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 CLDN14O95500 239 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 IL33O95760 270 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 IFI6P09912 130 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 ACP2P11117 423 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 ACVR2AP27037 513 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 HTR1EP28566 365 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 EVI2BP34910 448 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 DCTP40126 519 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 PSMD4P55036 377 aaKnown RBP13.14□□□□□ -0.31
TUBE1-208ENST00000604743 NME5P56597 212 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 CLDN8P56748 225 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 NUP107P57740 925 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 PRR5P85299 388 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 STX5Q13190 355 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 ART3Q13508 389 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 MLC1Q15049 377 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 LSM12Q3MHD2 195 aaKnown RBP13.14□□□□□ -0.31
TUBE1-208ENST00000604743 VPS26BQ4G0F5 336 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 OR4F3Q6IEY1 312 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 PLCZ1Q86YW0 608 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 RIMKLAQ8IXN7 391 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 SLC16A11Q8NCK7 471 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 OR14L1PQ8NHC6 308 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 OR5P2Q8WZ92 322 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 RND1Q92730 232 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 NTNG2Q96CW9 530 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 COQ8BQ96D53 544 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 BHLHE41Q9C0J9 482 aaPredicted RBP13.14□□□□□ -0.31
TUBE1-208ENST00000604743 CXorf36Q9H7Y0 433 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 MEAF6Q9HAF1 191 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 ASIC5Q9NY37 505 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 PPP4R1LQ9P1A2 415 aa13.14□□□□□ -0.31
TUBE1-208ENST00000604743 TTC36A6NLP5 189 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 SDHDO14521 159 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 NKX2-2O95096 273 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 UTS2O95399 124 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 IGKV1D-16P01601 117 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 ALOX5P09917 674 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 SOAT1P35610 550 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 CCT3P49368 545 aaKnown RBP13.13□□□□□ -0.31
TUBE1-208ENST00000604743 PRIM2P49643 509 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 TP53BP2Q13625 1128 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 LASP1Q14847 261 aaKnown RBP13.13□□□□□ -0.31
TUBE1-208ENST00000604743 DUSP5Q16690 384 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 TTMPQ5BVD1 217 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 NXNQ6DKJ4 435 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 MFSD12Q6NUT3 480 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 FIGNL1Q6PIW4 674 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 B3GNT6Q6ZMB0 384 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 HDXQ7Z353 690 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 CCDC71Q8IV32 467 aaPredicted RBP13.13□□□□□ -0.31
TUBE1-208ENST00000604743 NATD1Q8N6N6 113 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 OR4K17Q8NGC6 315 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 OR5AK3PQ8NH89 298 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 CA5BP1Q8WTZ4 195 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 ABTB1Q969K4 478 aaPredicted RBP13.13□□□□□ -0.31
TUBE1-208ENST00000604743 ATP6V1G3Q96LB4 118 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 WDR55Q9H6Y2 383 aaPredicted RBP13.13□□□□□ -0.31
TUBE1-208ENST00000604743 NTMQ9P121 344 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 DKKL1Q9UK85 242 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 FBXL2Q9UKC9 423 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 CAMK2AQ9UQM7 478 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 RNF6Q9Y252 685 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 FAM215AQ9Y5M1 114 aa13.13□□□□□ -0.31
TUBE1-208ENST00000604743 NAV2Q8IVL1 2488 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms