RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 OR10Q1Q8NGQ4 319 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 C16orf52Q8NHV5 167 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GATA6Q92908 595 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SENP5Q96HI0 755 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CTRCQ99895 268 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CNPPD1Q9BV87 410 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DDA1Q9BW61 102 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 YIPF2Q9BWQ6 316 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 HOXD1Q9GZZ0 328 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SEMA4GQ9NTN9 838 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ACER3Q9NUN7 267 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OCIAD1Q9NX40 245 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 VNN3Q9NY84 501 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 COPS7AQ9UBW8 275 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 C19orf25Q9UFG5 118 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ERVK-19Q9WJR5 959 aa11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZNF443Q9Y2A4 671 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GPR55Q9Y2T6 319 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PCNX2A6NKB5 2137 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MEN1O00255 615 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 FAAHO00519 579 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SLC16A6O15403 523 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GADD45GO95257 159 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZIC2O95409 532 aaPredicted RBP11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DDAH2O95865 285 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 KLK3P07288 261 aaPredicted RBP11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CT45A8P0DMV1 189 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CT45A9P0DMV2 189 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TNNI3P19429 210 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 IGFBP5P24593 272 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SSTR4P31391 388 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GABRA3P34903 492 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OR1E2P47887 323 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 EEF1A1P68104 462 aaKnown RBP11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SPIBQ01892 262 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PDK3Q15120 406 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZNF141Q15928 474 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MICAQ29983 383 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CT45A2Q5DJT8 189 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PRAMEF17Q5VTA0 474 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 C1orf189Q5VU69 101 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TBPL2Q6SJ96 375 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 B3GNT8Q7Z7M8 397 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TMEM179BQ7Z7N9 219 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SHISA5Q8N114 240 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PARP8Q8N3A8 854 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SLC38A9Q8NBW4 561 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SIMC1Q8NDZ2 872 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OR1N1Q8NGS0 311 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OR8K3Q8NH51 312 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SLC2A12Q8TD20 617 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZNF721Q8TF20 911 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GIPC3Q8TF64 312 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PHF10Q8WUB8 498 aaKnown RBP11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 YTHDF1Q9BYJ9 559 aaKnown RBP11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SEMA4CQ9C0C4 833 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 BATF3Q9NR55 127 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PNPLA3Q9NST1 481 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CTSFQ9UBX1 484 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TMEFF2Q9UIK5 374 aaPredicted RBP11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MKL2Q9ULH7 1088 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 HSPE1-MOB4S4R3N1 261 aa11.4□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 A0A1W2PQ72 361 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SAGE2PA6NJ88 616 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NPIPB9F8W1W9 429 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FCMRO60667 390 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 UGT2B11O75310 529 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ALOX12BO75342 701 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 UGT2B17O75795 530 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TNFAIP8O95379 198 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TIAF1O95411 115 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 EPPINO95925 133 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ADAP00813 363 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 H1F0P07305 194 aaKnown RBP11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 IL7RP16871 459 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ENDOUP21128 410 aaKnown RBP11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ADH7P40394 386 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NBL1P41271 181 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CHN2P52757 468 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 IST1P53990 364 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 KEAP1Q14145 624 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SF3A2Q15428 464 aaKnown RBP11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 VWA2Q5GFL6 755 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 C6orf52Q5T4I8 152 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MFSD4BQ5TF39 518 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TMEM205Q6UW68 189 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 UGT2A3Q6UWM9 527 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PIP4P1Q86T03 277 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ZNF555Q8NEP9 628 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 METTL21AQ8WXB1 218 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TSLPQ969D9 159 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TP53INP1Q96A56 240 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 HSPBAP1Q96EW2 488 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 OTUB1Q96FW1 271 aaPredicted RBP11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FUZQ9BT04 418 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 RSPO3Q9BXY4 272 aaPredicted RBP11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 GABARAPL3Q9BY60 117 aa11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PDP1Q9P0J1 537 aaPredicted RBP11.39□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 KIF17Q9P2E2 1029 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms