RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MYO1GB0I1T2 1018 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 GOLGA8RI6L899 631 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 MSTNO14793 375 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 COQ9O75208 318 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 JUNP05412 331 aaKnown RBP11.89□□□□□ -0.51
RPS28-204ENST00000602140 ABHD2P08910 425 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 PEPDP12955 493 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 DDCP20711 480 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 MC3RP41968 323 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 GSTM5P46439 218 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 NCBP2P52298 156 aaKnown RBP eCLIP11.89□□□□□ -0.51
RPS28-204ENST00000602140 FAM27E3Q08E93 113 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 STX5Q13190 355 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 RAET1LQ5VY80 246 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 TMEM107Q6UX40 140 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 CNEP1R1Q8N9A8 125 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 FADS6Q8N9I5 356 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 OR2M3Q8NG83 312 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 STARD4Q96DR4 205 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 SHCBP1LQ9BZQ2 653 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 SIRT5Q9NXA8 310 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 FLRT3Q9NZU0 649 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 MED11Q9P086 117 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 TESMINQ9Y4I5 508 aa11.89□□□□□ -0.51
RPS28-204ENST00000602140 A0A087WV62 115 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 SERTM1A2A2V5 107 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 SLC22A20A6NK97 555 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 H0YC42 278 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 FADS1O60427 444 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 CRHP06850 196 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 PYGBP11216 843 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 HK1P19367 917 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 FOXA1P55317 472 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 TPD52P55327 224 aaPredicted RBP11.88□□□□□ -0.51
RPS28-204ENST00000602140 NKX6-1P78426 367 aaPredicted RBP11.88□□□□□ -0.51
RPS28-204ENST00000602140 ZNF763Q0D2J5 394 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 IMPG1Q17R60 797 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 CYP27C1Q4G0S4 372 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 OR2A2Q6IF42 318 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 VWA1Q6PCB0 445 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 BTLAQ7Z6A9 289 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 MED12LQ86YW9 2145 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 KRTAP1-3Q8IUG1 177 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 MEIOBQ8N635 442 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 CCNYL1Q8N7R7 359 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 FIG4Q92562 907 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 PGM2Q96G03 612 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 FAM111AQ96PZ2 611 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 SMR3AQ99954 134 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 GSTO2Q9H4Y5 243 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 MID1IP1Q9NPA3 183 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 MIEF1Q9NQG6 463 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 SDHAF3Q9NRP4 125 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 BEX4Q9NWD9 120 aaPredicted RBP11.88□□□□□ -0.51
RPS28-204ENST00000602140 KLHL28Q9NXS3 571 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 C6orf203Q9P0P8 240 aaPredicted RBP11.88□□□□□ -0.51
RPS28-204ENST00000602140 ABCG2Q9UNQ0 655 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 C19orf53Q9UNZ5 99 aaPredicted RBP11.88□□□□□ -0.51
RPS28-204ENST00000602140 ZNF337Q9Y3M9 751 aa11.88□□□□□ -0.51
RPS28-204ENST00000602140 UPK1AO00322 258 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 UBFD1O14562 309 aaKnown RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 SEC14L5O43304 696 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 CTIFO43310 598 aaKnown RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 RIPK2O43353 540 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 CD79BP40259 229 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 KIR2DL2P43627 348 aaPredicted RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 RFX3P48380 749 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 SUCLG1P53597 346 aaKnown RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 CLDN15P56746 228 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 EEFSECP57772 596 aaKnown RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 SIRPAP78324 504 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 DECR1Q16698 335 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 FAM71E1Q6IPT2 247 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 ZNF474Q6S9Z5 364 aaPredicted RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 Q71RC1 249 aaPredicted RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 TRMT10CQ7L0Y3 403 aaKnown RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 BIVMQ86UB2 503 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 OR5M1Q8NGP8 315 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.87□□□□□ -0.51
RPS28-204ENST00000602140 ACMSDQ8TDX5 336 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 DUSP19Q8WTR2 217 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 C18orf12Q96KH6 178 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 WFIKKN1Q96NZ8 548 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 PINK1Q9BXM7 581 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 RTN4RQ9BZR6 473 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 OPN3Q9H1Y3 402 aaPredicted RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 GLIPR2Q9H4G4 154 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 PTGES2Q9H7Z7 377 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 Q9N2J8 555 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 MYNNQ9NPC7 610 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 DDX18Q9NVP1 670 aaKnown RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 TAS2R7Q9NYW3 318 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 GRID1Q9ULK0 1009 aa11.87□□□□□ -0.51
RPS28-204ENST00000602140 POLR3HQ9Y535 204 aaPredicted RBP11.87□□□□□ -0.51
RPS28-204ENST00000602140 OR2M5A3KFT3 312 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 H3BML4 177 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 SIAH2O43255 324 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 TNFRSF21O75509 655 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 SLITRK5O94991 958 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 IL33O95760 270 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms