RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 KNTC1P50748 2209 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 C2orf92A0A1B0GVN3 265 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 SAGE2PA6NJ88 616 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 C9orf172C9J069 976 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 DPM1O60762 260 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 ZIC2O95409 532 aaPredicted RBP16.68■□□□□ 0.26
VRK3-225ENST00000601912 IL7RP16871 459 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 PRKAR1BP31321 381 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 PIGAP37287 484 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 RFX3P48380 749 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 ARHGDIAP52565 204 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 AP1ARQ63HQ0 302 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 TMPRSS12Q86WS5 348 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 ZDHHC13Q8IUH4 622 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 SVOPLQ8N434 492 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 B3GNT7Q8NFL0 401 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 ZG16BQ96DA0 208 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 ZNF300Q96RE9 604 aaPredicted RBP16.68■□□□□ 0.26
VRK3-225ENST00000601912 REEP1Q9H902 201 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 KLHL28Q9NXS3 571 aa16.68■□□□□ 0.26
VRK3-225ENST00000601912 CCDC88CQ9P219 2028 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 IGHV3-20A0A0C4DH32 117 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 A0A1W2PNU3 283 aaPredicted RBP16.67■□□□□ 0.26
VRK3-225ENST00000601912 AGAP5A6NIR3 686 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 G3V2T6 193 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 SYT5O00445 386 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 PCDH17O14917 1159 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 KIAA0513O60268 411 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 DLGAP3O95886 979 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 LGI1O95970 557 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 DBIP07108 87 aaKnown RBP16.67■□□□□ 0.26
VRK3-225ENST00000601912 THBS1P07996 1170 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 CEACAM1P13688 526 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 DRD5P21918 477 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 TARDBPQ13148 414 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■■■■□ 23
VRK3-225ENST00000601912 PUM1Q14671 1186 aaKnown RBP eCLIP16.67■□□□□ 0.26
VRK3-225ENST00000601912 IQCCQ4KMZ1 466 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 PAPD4Q6PIY7 484 aaKnown RBP16.67■□□□□ 0.26
VRK3-225ENST00000601912 DHRS4L2Q6PKH6 230 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 HMGN2P46Q86SG4 172 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 CARM1Q86X55 608 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 GALNT4Q8N4A0 578 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 PACRGLQ8N7B6 248 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 OR4N2Q8NGD1 307 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 OR2Y1Q8NGV0 311 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 APOBEC4Q8WW27 367 aaKnown RBP16.67■□□□□ 0.26
VRK3-225ENST00000601912 LCORQ96JN0 433 aaPredicted RBP16.67■□□□□ 0.26
VRK3-225ENST00000601912 GAL3ST4Q96RP7 486 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 AMBRA1Q9C0C7 1298 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 MRTO4Q9UKD2 239 aaKnown RBP16.67■□□□□ 0.26
VRK3-225ENST00000601912 LRRC42Q9Y546 428 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 ENPP4Q9Y6X5 453 aa16.67■□□□□ 0.26
VRK3-225ENST00000601912 FRG2CA6NGY1 282 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 ADAMDEC1O15204 470 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 KLF7O75840 302 aaPredicted RBP16.66■□□□□ 0.26
VRK3-225ENST00000601912 DIRAS1O95057 198 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 ZNF26P17031 533 aaPredicted RBP16.66■□□□□ 0.26
VRK3-225ENST00000601912 RHCEP18577 417 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 FOLR3P41439 243 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 NNATQ16517 81 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 DECR1Q16698 335 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 FLYWCH1Q4VC44 716 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 PPP4R4Q6NUP7 873 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 CYP4Z1Q86W10 505 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 VRK2Q86Y07 508 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 KBTBD2Q8IY47 623 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 CBR4Q8N4T8 237 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 ESX1Q8N693 406 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 OR5K1Q8NHB7 308 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 B3GNT4Q9C0J1 378 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 ARMC7Q9H6L4 198 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 FBXO34Q9NWN3 711 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 PPIEQ9UNP9 301 aaKnown RBP16.66■□□□□ 0.26
VRK3-225ENST00000601912 ZNF443Q9Y2A4 671 aaPredicted RBP16.66■□□□□ 0.26
VRK3-225ENST00000601912 C15orf41Q9Y2V0 281 aa16.66■□□□□ 0.26
VRK3-225ENST00000601912 RIF1Q5UIP0 2472 aaKnown RBP16.66■□□□□ 0.26
VRK3-225ENST00000601912 PRAMEF25A6NGN4 478 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 H0YJX3 145 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 PDLIM1O00151 329 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 ACOX3O15254 700 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 TNFSF15O95150 251 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 IGHEP01854 428 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 GPR143P51810 404 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 PSMD4P55036 377 aaKnown RBP16.65■□□□□ 0.26
VRK3-225ENST00000601912 AQP4P55087 323 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 EBPQ15125 230 aaKnown RBP16.65■□□□□ 0.26
VRK3-225ENST00000601912 NRF1Q16656 503 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 LIN52Q52LA3 116 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 EIPR1Q53HC9 387 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 HIPK1Q86Z02 1210 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 EPHX4Q8IUS5 362 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 C9orf40Q8IXQ3 194 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 BCORP1Q8N888 145 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 NFAM1Q8NET5 270 aaPredicted RBP16.65■□□□□ 0.26
VRK3-225ENST00000601912 VANGL1Q8TAA9 524 aaPredicted RBP16.65■□□□□ 0.26
VRK3-225ENST00000601912 ADIPOR1Q96A54 375 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 VMP1Q96GC9 406 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 PIP5K1AQ99755 562 aa16.65■□□□□ 0.26
VRK3-225ENST00000601912 RSPO3Q9BXY4 272 aaPredicted RBP16.65■□□□□ 0.26
VRK3-225ENST00000601912 SPRY4Q9C004 299 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms