RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 MILR1Q7Z6M3 343 aa15.04■□□□□ -0
USE1-208ENST00000600970 WFDC8Q8IUA0 241 aa15.04■□□□□ -0
USE1-208ENST00000600970 SLC44A2Q8IWA5 706 aaPredicted RBP15.04■□□□□ -0
USE1-208ENST00000600970 PTGR2Q8N8N7 351 aaPredicted RBP15.04■□□□□ -0
USE1-208ENST00000600970 OR4F6Q8NGB9 312 aa15.04■□□□□ -0
USE1-208ENST00000600970 OR6K3Q8NGY3 331 aa15.04■□□□□ -0
USE1-208ENST00000600970 TMEM158Q8WZ71 300 aa15.04■□□□□ -0
USE1-208ENST00000600970 PHF21BQ96EK2 531 aa15.04■□□□□ -0
USE1-208ENST00000600970 NSUN5Q96P11 429 aaKnown RBP15.04■□□□□ -0
USE1-208ENST00000600970 FAIM2Q9BWQ8 316 aa15.04■□□□□ -0
USE1-208ENST00000600970 STMN4Q9H169 189 aaPredicted RBP15.04■□□□□ -0
USE1-208ENST00000600970 PFDN4Q9NQP4 134 aa15.04■□□□□ -0
USE1-208ENST00000600970 WHRNQ9P202 907 aa15.04■□□□□ -0
USE1-208ENST00000600970 PCTPQ9UKL6 214 aa15.04■□□□□ -0
USE1-208ENST00000600970 USF3Q68DE3 2245 aa15.04■□□□□ -0
USE1-208ENST00000600970 ATRQ13535 2644 aa15.03■□□□□ -0
USE1-208ENST00000600970 HMX2A2RU54 273 aa15.03■□□□□ -0
USE1-208ENST00000600970 OVOL3O00110 214 aa15.03■□□□□ -0
USE1-208ENST00000600970 CD5LO43866 347 aa15.03■□□□□ -0
USE1-208ENST00000600970 FADS1O60427 444 aa15.03■□□□□ -0
USE1-208ENST00000600970 PDYNP01213 254 aa15.03■□□□□ -0
USE1-208ENST00000600970 TRA2BP62995 288 aaKnown RBP15.03■□□□□ -0
USE1-208ENST00000600970 PSPHP78330 225 aa15.03■□□□□ -0
USE1-208ENST00000600970 MRPS22P82650 360 aaKnown RBP15.03■□□□□ -0
USE1-208ENST00000600970 OCRLQ01968 901 aa15.03■□□□□ -0
USE1-208ENST00000600970 NAB1Q13506 487 aa15.03■□□□□ -0
USE1-208ENST00000600970 ETFDHQ16134 617 aa15.03■□□□□ -0
USE1-208ENST00000600970 SGCBQ16585 318 aa15.03■□□□□ -0
USE1-208ENST00000600970 ERCC6LQ2NKX8 1250 aa15.03■□□□□ -0
USE1-208ENST00000600970 GGTA1PQ4G0N0 100 aa15.03■□□□□ -0
USE1-208ENST00000600970 KLC3Q6P597 504 aa15.03■□□□□ -0
USE1-208ENST00000600970 OR9A2Q8NGT5 310 aa15.03■□□□□ -0
USE1-208ENST00000600970 GFM2Q969S9 779 aaKnown RBP15.03■□□□□ -0
USE1-208ENST00000600970 ERP27Q96DN0 273 aa15.03■□□□□ -0
USE1-208ENST00000600970 TRMT61AQ96FX7 289 aaKnown RBP15.03■□□□□ -0
USE1-208ENST00000600970 RTN4RQ9BZR6 473 aa15.03■□□□□ -0
USE1-208ENST00000600970 ELOVL6Q9H5J4 265 aa15.03■□□□□ -0
USE1-208ENST00000600970 FLRT3Q9NZU0 649 aa15.03■□□□□ -0
USE1-208ENST00000600970 CLEC4AQ9UMR7 237 aa15.03■□□□□ -0
USE1-208ENST00000600970 EMC9Q9Y3B6 208 aa15.03■□□□□ -0
USE1-208ENST00000600970 MXRA5Q9NR99 2828 aa15.02■□□□□ -0
USE1-208ENST00000600970 UQCRHLA0A096LP55 91 aa15.02■□□□□ -0
USE1-208ENST00000600970 A0A096LPK6 155 aa15.02■□□□□ -0
USE1-208ENST00000600970 ZSCAN12O43309 604 aa15.02■□□□□ -0
USE1-208ENST00000600970 ALDOAP04075 364 aaKnown RBP15.02■□□□□ -0
USE1-208ENST00000600970 FCGR2AP12318 317 aa15.02■□□□□ -0
USE1-208ENST00000600970 IL11P20809 199 aa15.02■□□□□ -0
USE1-208ENST00000600970 STX2P32856 288 aa15.02■□□□□ -0
USE1-208ENST00000600970 IDUAP35475 653 aa15.02■□□□□ -0
USE1-208ENST00000600970 SLC6A8P48029 635 aa15.02■□□□□ -0
USE1-208ENST00000600970 STX5Q13190 355 aa15.02■□□□□ -0
USE1-208ENST00000600970 FAM219BQ5XKK7 198 aa15.02■□□□□ -0
USE1-208ENST00000600970 GGNQ86UU5 652 aa15.02■□□□□ -0
USE1-208ENST00000600970 C1orf52Q8N6N3 182 aaKnown RBP15.02■□□□□ -0
USE1-208ENST00000600970 LILRB1Q8NHL6 650 aaPredicted RBP15.02■□□□□ -0
USE1-208ENST00000600970 UHMK1Q8TAS1 419 aaKnown RBP15.02■□□□□ -0
USE1-208ENST00000600970 RAB3IL1Q8TBN0 382 aa15.02■□□□□ -0
USE1-208ENST00000600970 C1GALT1C1Q96EU7 318 aa15.02■□□□□ -0
USE1-208ENST00000600970 ERP44Q9BS26 406 aa15.02■□□□□ -0
USE1-208ENST00000600970 ACTR6Q9GZN1 396 aa15.02■□□□□ -0
USE1-208ENST00000600970 PTGES2Q9H7Z7 377 aa15.02■□□□□ -0
USE1-208ENST00000600970 BRF2Q9HAW0 419 aa15.02■□□□□ -0
USE1-208ENST00000600970 YAE1D1Q9NRH1 226 aa15.02■□□□□ -0
USE1-208ENST00000600970 SDHAF3Q9NRP4 125 aa15.02■□□□□ -0
USE1-208ENST00000600970 GRHL1Q9NZI5 618 aa15.02■□□□□ -0
USE1-208ENST00000600970 OR10H1Q9Y4A9 318 aa15.02■□□□□ -0
USE1-208ENST00000600970 AP4B1Q9Y6B7 739 aa15.02■□□□□ -0
USE1-208ENST00000600970 ESRRBO95718 433 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 ACVR1BP36896 505 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 PSG6Q00889 435 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 GLYR1Q49A26 553 aaPredicted RBP15.01□□□□□ -0.01
USE1-208ENST00000600970 PPP4R4Q6NUP7 873 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 ADAM5Q6NVV9 412 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 RPS27LQ71UM5 84 aaKnown RBP15.01□□□□□ -0.01
USE1-208ENST00000600970 PLD6Q8N2A8 252 aaKnown RBP15.01□□□□□ -0.01
USE1-208ENST00000600970 SELENOMQ8WWX9 145 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 GMPPAQ96IJ6 420 aaPredicted RBP15.01□□□□□ -0.01
USE1-208ENST00000600970 PRRG4Q9BZD6 226 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 OR10A4Q9H209 315 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 TAS2R9Q9NYW1 312 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 ABCG2Q9UNQ0 655 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 SAR1BQ9Y6B6 198 aa15.01□□□□□ -0.01
USE1-208ENST00000600970 STX16-NPEPL1H3BU86 382 aa15□□□□□ -0.01
USE1-208ENST00000600970 STX16O14662 325 aa15□□□□□ -0.01
USE1-208ENST00000600970 PLOD3O60568 738 aa15□□□□□ -0.01
USE1-208ENST00000600970 SS18L1O75177 396 aaPredicted RBP15□□□□□ -0.01
USE1-208ENST00000600970 PLGP00747 810 aaPredicted RBP15□□□□□ -0.01
USE1-208ENST00000600970 SOD3P08294 240 aa15□□□□□ -0.01
USE1-208ENST00000600970 CDKN1AP38936 164 aa15□□□□□ -0.01
USE1-208ENST00000600970 PAFAH1B1P43034 410 aa15□□□□□ -0.01
USE1-208ENST00000600970 MAGEA4P43358 317 aa15□□□□□ -0.01
USE1-208ENST00000600970 CTBP2P56545 445 aa15□□□□□ -0.01
USE1-208ENST00000600970 ZNF844Q08AG5 666 aa15□□□□□ -0.01
USE1-208ENST00000600970 CPEB4Q17RY0 729 aaKnown RBP eCLIP15□□□□□ -0.01
USE1-208ENST00000600970 CTU2Q2VPK5 515 aaKnown RBP15□□□□□ -0.01
USE1-208ENST00000600970 LETMD1Q6P1Q0 360 aa15□□□□□ -0.01
USE1-208ENST00000600970 BEND4Q6ZU67 534 aa15□□□□□ -0.01
USE1-208ENST00000600970 OR7G2Q8NG99 324 aa15□□□□□ -0.01
USE1-208ENST00000600970 DUSP19Q8WTR2 217 aa15□□□□□ -0.01
USE1-208ENST00000600970 EXOSC8Q96B26 276 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms