RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 H3BML4 177 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 UBFD1O14562 309 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 HRGP04196 525 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 ABHD2P08910 425 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 MYL2P10916 166 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 PEPDP12955 493 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 DDCP20711 480 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 CHMP24386 653 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 NTSP30990 170 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 KCNJ5P48544 419 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 GAS1P54826 345 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 TPD52P55327 224 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 DSCR4P56555 118 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 ZNF763Q0D2J5 394 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 DECR1Q16698 335 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 CFAP157Q5JU67 520 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 TRMT10CQ7L0Y3 403 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 ADGRE4PQ86SQ3 457 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 MARCH3Q86UD3 253 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 IFT20Q8IY31 132 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 MEIOBQ8N635 442 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 DUSP19Q8WTR2 217 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 GFM2Q969S9 779 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 MBD6Q96DN6 1003 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 L3HYPDHQ96EM0 354 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 PGM2Q96G03 612 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 DACH2Q96NX9 599 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 RHOXF2Q9BQY4 288 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 OPN3Q9H1Y3 402 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 GSTO2Q9H4Y5 243 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 EQTNQ9NQ60 294 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 SDHAF3Q9NRP4 125 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 DDX18Q9NVP1 670 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 KLHL28Q9NXS3 571 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 C6orf203Q9P0P8 240 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 A0A1W2PPM1 405 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 A8MXE2 369 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 MYO1GB0I1T2 1018 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 FAM153BP0C7A2 387 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 B3GALT5-AS1P59052 145 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 PSG6Q00889 435 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 SLC29A2Q14542 456 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 FAM153CQ494X1 144 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 VWA1Q6PCB0 445 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 CCDC63Q8NA47 563 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 OR2M3Q8NG83 312 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 FIG4Q92562 907 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 ZC3HAV1LQ96H79 300 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 PINK1Q9BXM7 581 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 STMN4Q9H169 189 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 PSMC3IPQ9P2W1 217 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 DCDC2Q9UHG0 476 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 FIS1Q9Y3D6 152 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 ZNF337Q9Y3M9 751 aa15.89■□□□□ 0.13
SHKBP1-223ENST00000600552 UQCRHLA0A096LP55 91 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 A0A1W2PPR1 153 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 SMIM23A6NLE4 172 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 SHISA8B8ZZ34 492 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 TNFSF13O75888 250 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 CLK3P49761 638 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 SUCLG1P53597 346 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 ZNHIT3Q15649 155 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 FAM71E1Q6IPT2 247 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 ANKRD26P1Q6NSI1 321 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 GALNT18Q6P9A2 607 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 SZRD1Q7Z422 152 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 BTLAQ7Z6A9 289 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 GALNT10Q86SR1 603 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 LCA5Q86VQ0 697 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 GSPT2Q8IYD1 628 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 STARD4Q96DR4 205 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 WFIKKN1Q96NZ8 548 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 UCN2Q96RP3 112 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 SMR3AQ99954 134 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 RTN4RQ9BZR6 473 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 GLIPR2Q9H4G4 154 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 PTGES2Q9H7Z7 377 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 Q9N2J8 555 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 EMCNQ9ULC0 261 aa15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 C19orf53Q9UNZ5 99 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 MRPS18CQ9Y3D5 142 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 FLNAP21333 2647 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-223ENST00000600552 GXYLT2A0PJZ3 443 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 UPK1AO00322 258 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 FADS1O60427 444 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 SEC22BO75396 215 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 GABRA3P34903 492 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 GPC1P35052 558 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 PRKAG1P54619 331 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 EEF1A1P68104 462 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 PSPHP78330 225 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 NKX6-1P78426 367 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 HSPB3Q12988 150 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 CYP27C1Q4G0S4 372 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 EEF1A1P5Q5VTE0 462 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 ANKRD34AQ69YU3 496 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 OR2A2Q6IF42 318 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 NOXRED1Q6NXP6 359 aa15.87■□□□□ 0.13
SHKBP1-223ENST00000600552 ZYG11AQ6WRX3 759 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms