RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 S1PR1P21453 382 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 TRHRP34981 398 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 MASP1P48740 699 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 TARDBPQ13148 414 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 SHBQ15464 509 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 GPR68Q15743 365 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 MAPK14Q16539 360 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 DCST2Q5T1A1 773 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 VWA5B2Q8N398 1253 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 CDRT4Q8N9R6 151 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 OR4K5Q8NGD3 323 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 OR52R1Q8NGF1 315 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 FAR1Q8WVX9 515 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 AMBNQ9NP70 447 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 DUSP22Q9NRW4 184 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 TMEM9Q9P0T7 183 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 SLC13A4Q9UKG4 626 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 SPEGQ15772 3267 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 GXYLT2A0PJZ3 443 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 CPSF4LA6NMK7 179 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF701M0R085 212 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 HRKO00198 91 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 OSMP13725 252 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 ITIH1P19827 911 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 CTSKP43235 329 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 MAPK10P53779 464 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 UGT2B15P54855 530 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 GP2P55259 537 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 AMZ1Q400G9 498 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF836Q6ZNA1 936 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 AHSA2Q719I0 299 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 ZER1Q7Z7L7 766 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 LSRQ86X29 649 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 ALDH16A1Q8IZ83 802 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 GPR151Q8TDV0 419 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 MMABQ96EY8 250 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 AHCYL2Q96HN2 611 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 DOK1Q99704 481 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 GPA33Q99795 319 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 SEMA4GQ9NTN9 838 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 SUSD2Q9UGT4 822 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 KCNE5Q9UJ90 142 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 PCDHGB1Q9Y5G3 927 aa15.86■□□□□ 0.13
SHKBP1-216ENST00000598201 NPIPA5A0A0B4J1W7 369 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 AGAP5A6NIR3 686 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 NPIPA7E9PJI5 369 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 H3BMQ9 156 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 TMX2-CTNND1H3BSU7 103 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 NUDT21O43809 227 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 MAN1A2O60476 641 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 CTNSO60931 367 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ATE1O95260 518 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 TP53P04637 393 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 NPIPA8P0DM63 369 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 MMP11P24347 488 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 GABRA3P34903 492 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 SEPHS1P49903 392 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 TAS2R41P59536 307 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 MAP4K2Q12851 820 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 GARNL3Q5VVW2 1013 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 FIGNL1Q6PIW4 674 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 P3H2Q8IVL5 708 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 PEX5LQ8IYB4 626 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 COX18Q8N8Q8 333 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 Q8N9G6 341 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 OR6C4Q8NGE1 309 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 DIO2Q92813 273 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 CNDP2Q96KP4 475 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 COG8Q96MW5 612 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 SIGLEC11Q96RL6 698 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 STACQ99469 402 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 CHRNA10Q9GZZ6 450 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 CAPN10Q9HC96 672 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ENOPH1Q9UHY7 261 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ARID1BQ8NFD5 2236 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 FITM1A5D6W6 292 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 RGS10O43665 173 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 IFI6P09912 130 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 MAOAP21397 527 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 CSF2RBP32927 897 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 HOXD12P35452 270 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 RNF144AP50876 292 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 NUDT6P53370 316 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 EEF1A1P68104 462 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ILKQ13418 452 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 TUBA3CQ13748 450 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 TCTE1Q5JU00 501 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 PEAR1Q5VY43 1037 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ZCCHC12Q6PEW1 402 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 MEX3DQ86XN8 651 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 GALNT12Q8IXK2 581 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 DEPDC4Q8N2C3 294 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF420Q8TAQ5 688 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 CD180Q99467 661 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ALOXE3Q9BYJ1 711 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 POLR2J3Q9H1A7 115 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ARRDC1-AS1Q9H2J1 176 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 ERVMER34-1Q9H9K5 563 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 PRTFDC1Q9NRG1 225 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms