RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 EIPR1Q53HC9 387 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 BEND6Q5SZJ8 279 aaPredicted RBP13.77□□□□□ -0.21
TRIM28-205ENST00000595028 IL23RQ5VWK5 629 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 WDSUB1Q8N9V3 476 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 FAM83FQ8NEG4 500 aaPredicted RBP13.77□□□□□ -0.21
TRIM28-205ENST00000595028 CA5BP1Q8WTZ4 195 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 MS4A4EQ96PG1 132 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 TTYH2Q9BSA4 534 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 OR2B2Q9GZK3 357 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 C20orf27Q9GZN8 174 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 EQTNQ9NQ60 294 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 SERHLQ9NQF3 203 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 NTMQ9P121 344 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 HAO1Q9UJM8 370 aa13.77□□□□□ -0.21
TRIM28-205ENST00000595028 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.77□□□□□ -0.21
TRIM28-205ENST00000595028 NUP214P35658 2090 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 TMEM120BA0PK00 339 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 C2orf72A6NCS6 295 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 DIAPH2O60879 1101 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 HOXD4P09016 255 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 GLI4P10075 376 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 GABRA1P14867 456 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 EFNA1P20827 205 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 EVI2BP34910 448 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 PTGER4P35408 488 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 SLC1A6P48664 564 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 GAS1P54826 345 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 PMPCAQ10713 525 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 MAD2L1Q13257 205 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 GAB1Q13480 694 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 MLC1Q15049 377 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 NHSL2Q5HYW2 709 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 WIPI1Q5MNZ9 446 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 SZRD1Q7Z422 152 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 CCDC71Q8IV32 467 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 ULK2Q8IYT8 1036 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 KIRREL3Q8IZU9 778 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 KRTCAP2Q8N6L1 136 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 ANKRD42Q8N9B4 389 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 OR7A2PQ8NGA2 310 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 CEP70Q8NHQ1 597 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 HOXB13Q92826 284 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 GIMAP5Q96F15 307 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 UGT2B28Q9BY64 529 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 PRDM14Q9GZV8 571 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 C3orf14Q9HBI5 128 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 ASIC5Q9NY37 505 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 MRTO4Q9UKD2 239 aaKnown RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 ABCG2Q9UNQ0 655 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 EIF3LQ9Y262 564 aaKnown RBP13.76□□□□□ -0.21
TRIM28-205ENST00000595028 SLC6A5Q9Y345 797 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 ABCA2Q9BZC7 2435 aa13.76□□□□□ -0.21
TRIM28-205ENST00000595028 HCFC1P51610 2035 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 EMC8O43402 210 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 CBR3O75828 277 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 NKX2-2O95096 273 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 IL33O95760 270 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 LAMP1P11279 417 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 G6PDP11413 515 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 PRPS1L1P21108 318 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 MAP3K8P41279 467 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 RPL14P50914 215 aaKnown RBP13.75□□□□□ -0.21
TRIM28-205ENST00000595028 WDR4P57081 412 aaKnown RBP13.75□□□□□ -0.21
TRIM28-205ENST00000595028 C21orf58P58505 322 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 EMX2Q04743 252 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 BST1Q10588 318 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 STX3Q13277 289 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 SMU1Q2TAY7 513 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 VPS26BQ4G0F5 336 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 DCST1Q5T197 706 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 CPTPQ5TA50 214 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 HHATQ5VTY9 493 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 VASNQ6EMK4 673 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 MFSD12Q6NUT3 480 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 GDF7Q7Z4P5 450 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 YRDCQ86U90 279 aaKnown RBP13.75□□□□□ -0.21
TRIM28-205ENST00000595028 PLCZ1Q86YW0 608 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 RIMKLAQ8IXN7 391 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 CDRT4Q8N9R6 151 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 NUP43Q8NFH3 380 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 FBXO30Q8TB52 745 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 TLCD1Q96CP7 247 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 PPP1R36Q96LQ0 422 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 TIMP4Q99727 224 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 PAIP2Q9BPZ3 127 aaKnown RBP13.75□□□□□ -0.21
TRIM28-205ENST00000595028 SIRT3Q9NTG7 399 aaPredicted RBP13.75□□□□□ -0.21
TRIM28-205ENST00000595028 ATAD3AQ9NVI7 634 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 FAM120CQ9NX05 1096 aaKnown RBP13.75□□□□□ -0.21
TRIM28-205ENST00000595028 ALKBH4Q9NXW9 302 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 NOP53Q9NZM5 478 aaKnown RBP13.75□□□□□ -0.21
TRIM28-205ENST00000595028 FLRT3Q9NZU0 649 aa13.75□□□□□ -0.21
TRIM28-205ENST00000595028 ANKHD1Q8IWZ3 2542 aaKnown RBP13.75□□□□□ -0.21
TRIM28-205ENST00000595028 GXYLT2A0PJZ3 443 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 FAM90A27PA6NNH2 459 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 C17orf51A8MQB3 221 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 B4DXG7 233 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 SCO2O43819 266 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 FADS1O60427 444 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms