RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SLC30A6Q6NXT4 461 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 SPRED2Q7Z698 418 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 TMEM145Q8NBT3 493 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 SUSD6Q92537 303 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 TTC9Q92623 222 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 SLC38A2Q96QD8 506 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 OR7D2Q96RA2 312 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 ARHGAP9Q9BRR9 750 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 SLC13A4Q9UKG4 626 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 CLCA2Q9UQC9 943 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 KCNK6Q9Y257 313 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 GSTK1Q9Y2Q3 226 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 EXOSC1Q9Y3B2 195 aaKnown RBP15.46■□□□□ 0.07
LIG1-206ENST00000594067 HEATR5BQ9P2D3 2071 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 C1QTNF3-AMACRE9PGA6 284 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 ICMTO60725 284 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 HPGDSO60760 199 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 NCR1O76036 304 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 AIFM1O95831 613 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 GNSP15586 552 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 PTNP21246 168 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 FGF9P31371 208 aaPredicted RBP15.46■□□□□ 0.07
LIG1-206ENST00000594067 GABRA5P31644 462 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 TRHRP34981 398 aaPredicted RBP15.46■□□□□ 0.07
LIG1-206ENST00000594067 ANXA11P50995 505 aaKnown RBP15.46■□□□□ 0.07
LIG1-206ENST00000594067 CDH11P55287 796 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 CLDN20P56880 219 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 TSPAN31Q12999 210 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 INSL4Q14641 139 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 PIP5KL1Q5T9C9 394 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 TMEM64Q6YI46 380 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 RRM2BQ7LG56 351 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 ELMOD2Q8IZ81 293 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 ACOT4Q8N9L9 421 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 OR5H6Q8NGV6 325 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 MS4A6EQ96DS6 147 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 CAMK1GQ96NX5 476 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 TMED9Q9BVK6 235 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 HDHD5Q9BXW7 423 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 SLC38A1Q9H2H9 487 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 TBC1D17Q9HA65 648 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 IL20RAQ9UHF4 553 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 ENTPD4Q9Y227 616 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 PTPRSQ13332 1948 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 CHD7Q9P2D1 2997 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 KDM4EB2RXH2 506 aaPredicted RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 LYRM1O43325 122 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 OR2B3O76000 313 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 HIST1H1TP22492 207 aaPredicted RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 CERS1P27544 350 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 MC3RP41968 323 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 RAB8AP61006 207 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 GNA13Q14344 377 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 BTBD16Q32M84 506 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 MZT2BQ6NZ67 158 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 CD200R1LQ6Q8B3 271 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 MRGPREQ86SM8 312 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 NKAIN4Q8IVV8 208 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 RAB42Q8N4Z0 105 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 SUN5Q8TC36 379 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 SPPL3Q8TCT6 385 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 ZNF707Q96C28 371 aaPredicted RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 MARVELD1Q9BSK0 173 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 TRAF4Q9BUZ4 470 aaPredicted RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 GTPBP2Q9BX10 602 aaKnown RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 PRDM7Q9NQW5 492 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 PLEKHM1Q9Y4G2 1056 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 DNMT3AQ9Y6K1 912 aaPredicted RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 NUMA1Q14980 2115 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 FAM240BA0A1B0GVZ2 78 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 IRGMA1A4Y4 181 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 TBC1D3BA6NDS4 549 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 SMLR1H3BR10 107 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 SLC1A3P43003 542 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 EVX1P49640 407 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 TRAM2Q15035 370 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 DUSP6Q16828 381 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 BHLHB9Q6PI77 547 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 OR9A2Q8NGT5 310 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 OR4Q3Q8NH05 313 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 SFXN5Q8TD22 340 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 KCNJ15Q99712 375 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 TRIM45Q9H8W5 580 aaPredicted RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 POLMQ9NP87 494 aaPredicted RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 MRPS30Q9NP92 439 aaKnown RBP15.45■□□□□ 0.06
LIG1-206ENST00000594067 PRSS16Q9NQE7 514 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 ING3Q9NXR8 418 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 CHST2Q9Y4C5 530 aa15.45■□□□□ 0.06
LIG1-206ENST00000594067 C12orf71A8MTZ7 269 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 SCAMP1O15126 338 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 PRKAR1AP10644 381 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ATP5A1P25705 553 aaKnown RBP15.44■□□□□ 0.06
LIG1-206ENST00000594067 TRIM23P36406 574 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 IFNGR2P38484 337 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 GPR4P46093 362 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 OMPP47874 163 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 RAB28P51157 221 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ABATP80404 500 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ZIC1Q15915 447 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ZNF791Q3KP31 576 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms