RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ANKRD26P1Q6NSI1 321 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 C16orf47Q6ZP98 133 aaPredicted RBP18.14■□□□□ 0.49
LSM4-203ENST00000593829 TMEM156Q8N614 296 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 ZNF615Q8N8J6 731 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 Q8NA96 180 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 SOCS2O14508 198 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 SCAMP2O15127 329 aaKnown RBP18.13■□□□□ 0.49
LSM4-203ENST00000593829 PRPS1L1P21108 318 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 HLCSP50747 726 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 EBPQ15125 230 aaKnown RBP18.13■□□□□ 0.49
LSM4-203ENST00000593829 OR1C1Q15619 314 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 MPEG1Q2M385 716 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 SLC36A3Q495N2 470 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 TRMT12Q53H54 448 aaKnown RBP18.13■□□□□ 0.49
LSM4-203ENST00000593829 ZNF468Q5VIY5 522 aaPredicted RBP18.13■□□□□ 0.49
LSM4-203ENST00000593829 OGFOD2Q6N063 350 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 HORMAD2Q8N7B1 307 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 GAL3ST4Q96RP7 486 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 C9orf16Q9BUW7 83 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 WWTR1Q9GZV5 400 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 MUC13Q9H3R2 512 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 AGPAT4Q9NRZ5 378 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 CCDC167Q9P0B6 97 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 LRFN1Q9P244 771 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 ATP6V1HQ9UI12 483 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 NDUFAF1Q9Y375 327 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 CROCCQ5TZA2 2017 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 TTLL8A6PVC2 850 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 PDPK1O15530 556 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 PCSK2P16519 638 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 SOX18P35713 384 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 DIO3P55073 304 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 COQ5Q5HYK3 327 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 PATL1Q86TB9 770 aaKnown RBP18.13■□□□□ 0.49
LSM4-203ENST00000593829 CLVS1Q8IUQ0 354 aaPredicted RBP18.13■□□□□ 0.49
LSM4-203ENST00000593829 CANT1Q8WVQ1 401 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 KAT2AQ92830 837 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 C12orf43Q96C57 262 aaKnown RBP18.13■□□□□ 0.49
LSM4-203ENST00000593829 AMDHD1Q96NU7 426 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 SIGLEC12Q96PQ1 595 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 RASL10BQ96S79 203 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 GLIPR2Q9H4G4 154 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 TRIM45Q9H8W5 580 aaPredicted RBP18.13■□□□□ 0.49
LSM4-203ENST00000593829 CFL2Q9Y281 166 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 PCDHGA10Q9Y5H3 936 aa18.13■□□□□ 0.49
LSM4-203ENST00000593829 C2orf92A0A1B0GVN3 265 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 SLC28A2O43868 658 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 PRAMEF2O60811 474 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 TIPRLO75663 272 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 SLITRK5O94991 958 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 CBX7O95931 251 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 FCGR1AP12314 374 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 ATP6V1B2P21281 511 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 GPX3P22352 226 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 DCKP27707 260 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 SLC7A2P52569 658 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 MERTKQ12866 999 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 EXOSC7Q15024 291 aaKnown RBP18.12■□□□□ 0.49
LSM4-203ENST00000593829 ATP6AP1Q15904 470 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 ZNF385BQ569K4 471 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 HLA-DQA1Q5Y7H0 255 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 TTC33Q6PID6 262 aaPredicted RBP18.12■□□□□ 0.49
LSM4-203ENST00000593829 ZNF605Q86T29 641 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 MDS2Q8NDY4 140 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 ASB15Q8WXK1 588 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 ABTB1Q969K4 478 aaPredicted RBP18.12■□□□□ 0.49
LSM4-203ENST00000593829 HSPBAP1Q96EW2 488 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 ADI1Q9BV57 179 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 MAPRE3Q9UPY8 281 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 SH3GLB1Q9Y371 365 aa18.12■□□□□ 0.49
LSM4-203ENST00000593829 HNRNPCP07910 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
LSM4-203ENST00000593829 CLDN8P56748 225 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 STX1BP61266 288 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 CPTPQ5TA50 214 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 SPINK14Q6IE38 97 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 CYP2R1Q6VVX0 501 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 SPATA19Q7Z5L4 167 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 FUNDC1Q8IVP5 155 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 KRTCAP2Q8N6L1 136 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 OR7A2PQ8NGA2 310 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 OR52R1Q8NGF1 315 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 C16orf52Q8NHV5 167 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 BORCS5Q969J3 196 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 CIDECQ96AQ7 238 aaPredicted RBP18.11■□□□□ 0.49
LSM4-203ENST00000593829 ZBED6CLQ96FA7 236 aaPredicted RBP18.11■□□□□ 0.49
LSM4-203ENST00000593829 ACTR3BQ9P1U1 418 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 CNTRLQ7Z7A1 2325 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 DHRS12A0PJE2 317 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 PLOD3O60568 738 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 NEURL1O76050 574 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 GPIP06744 558 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 CD46P15529 392 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 ENTPD1P49961 510 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 CDH15P55291 814 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 C21orf58P58505 322 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 ZNF829Q3KNS6 432 aaPredicted RBP18.11■□□□□ 0.49
LSM4-203ENST00000593829 ZNF766Q5HY98 468 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 RIMKLAQ8IXN7 391 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 GPALPP1Q8IXQ4 340 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 SLC15A4Q8N697 577 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms