RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 STARD4Q96DR4 205 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 L3HYPDHQ96EM0 354 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 BBS4Q96RK4 519 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 A0A087WV62 115 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 SLC22A20A6NK97 555 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 MYO1GB0I1T2 1018 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 ANXA4P09525 319 aaPredicted RBP21.61■■□□□ 1.05
LSM4-202ENST00000593564 DDCP20711 480 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 CYP27C1Q4G0S4 372 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 GLE1Q53GS7 698 aaKnown RBP21.61■■□□□ 1.05
LSM4-202ENST00000593564 OR2M3Q8NG83 312 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 C18orf12Q96KH6 178 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 C16orf45Q96MC5 204 aaPredicted RBP21.61■■□□□ 1.05
LSM4-202ENST00000593564 DSN1Q9H410 356 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 ABCG2Q9UNQ0 655 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 TIMM22Q9Y584 194 aa21.61■■□□□ 1.05
LSM4-202ENST00000593564 SCO2O43819 266 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 FADS1O60427 444 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 SMNDC1O75940 238 aaKnown RBP eCLIP21.6■■□□□ 1.05
LSM4-202ENST00000593564 BTKQ06187 659 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 FAM27E3Q08E93 113 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 ZNF763Q0D2J5 394 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 GANABQ14697 944 aaKnown RBP21.6■■□□□ 1.05
LSM4-202ENST00000593564 VWA1Q6PCB0 445 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 CXorf67Q86X51 503 aaPredicted RBP21.6■■□□□ 1.05
LSM4-202ENST00000593564 MEIOBQ8N635 442 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 MNS1Q8NEH6 495 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 KCNA7Q96RP8 456 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 TAS2R7Q9NYW3 318 aa21.6■■□□□ 1.05
LSM4-202ENST00000593564 CTIFO43310 598 aaKnown RBP21.59■■□□□ 1.05
LSM4-202ENST00000593564 HK1P19367 917 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 MC3RP41968 323 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 NCBP2P52298 156 aaKnown RBP eCLIP21.59■■□□□ 1.054e-7■□□□□ 8.2
LSM4-202ENST00000593564 EEFSECP57772 596 aaKnown RBP21.59■■□□□ 1.05
LSM4-202ENST00000593564 NKX6-1P78426 367 aaPredicted RBP21.59■■□□□ 1.05
LSM4-202ENST00000593564 PRSS53Q2L4Q9 553 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 RAET1LQ5VY80 246 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 SHEQ5VZ18 495 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 UBQLNLQ8IYU4 475 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 CNEP1R1Q8N9A8 125 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 GSTO2Q9H4Y5 243 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 SDHAF3Q9NRP4 125 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 GRID1Q9ULK0 1009 aa21.59■■□□□ 1.05
LSM4-202ENST00000593564 C19orf53Q9UNZ5 99 aaPredicted RBP21.59■■□□□ 1.05
LSM4-202ENST00000593564 NSD1Q96L73 2696 aaPredicted RBP21.59■■□□□ 1.05
LSM4-202ENST00000593564 DNHD1Q96M86 4753 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 LINC01387J3KSC0 135 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 TNFRSF21O75509 655 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 PSMG1O95456 288 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 JUNP05412 331 aaKnown RBP21.58■■□□□ 1.05
LSM4-202ENST00000593564 CD79BP40259 229 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 KIR2DL2P43627 348 aaPredicted RBP21.58■■□□□ 1.05
LSM4-202ENST00000593564 CLDN15P56746 228 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 C2orf80Q0P641 193 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 SH2D4BQ5SQS7 431 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 FAM71E1Q6IPT2 247 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 TMEM107Q6UX40 140 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 BTLAQ7Z6A9 289 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.58■■□□□ 1.05
LSM4-202ENST00000593564 ACMSDQ8TDX5 336 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 FIG4Q92562 907 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 WFIKKN1Q96NZ8 548 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 MED11Q9P086 117 aa21.58■■□□□ 1.05
LSM4-202ENST00000593564 C6orf203Q9P0P8 240 aaPredicted RBP21.58■■□□□ 1.05
LSM4-202ENST00000593564 SIAH2O43255 324 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 GSTA1P08263 222 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 STX5Q13190 355 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 DECR1Q16698 335 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 SPDYAQ5MJ70 313 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 ZNF474Q6S9Z5 364 aaPredicted RBP21.57■■□□□ 1.04
LSM4-202ENST00000593564 TRMT10CQ7L0Y3 403 aaKnown RBP21.57■■□□□ 1.04
LSM4-202ENST00000593564 OR2L13Q8N349 312 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 CDC26Q8NHZ8 85 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 PGM2Q96G03 612 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 FAM111AQ96PZ2 611 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 PIP5K1AQ99755 562 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 SMR3AQ99954 134 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 RTN4RQ9BZR6 473 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 PTGES2Q9H7Z7 377 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 Q9N2J8 555 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 MID1IP1Q9NPA3 183 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 MYNNQ9NPC7 610 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 MIEF1Q9NQG6 463 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 FAM120CQ9NX05 1096 aaKnown RBP21.57■■□□□ 1.04
LSM4-202ENST00000593564 ELOVL5Q9NYP7 299 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 ZNF226Q9NYT6 803 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 FLRT3Q9NZU0 649 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 WBP11Q9Y2W2 641 aaKnown RBP21.57■■□□□ 1.04
LSM4-202ENST00000593564 ZNF337Q9Y3M9 751 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 ZNF175Q9Y473 711 aa21.57■■□□□ 1.04
LSM4-202ENST00000593564 OR2M5A3KFT3 312 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 DEFB108AA8MXU0 73 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 UPK1AO00322 258 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 RIPK2O43353 540 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 EMC8O43402 210 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 IL33O95760 270 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 INHBBP09529 407 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 ADSLP30566 484 aaPredicted RBP21.56■■□□□ 1.04
LSM4-202ENST00000593564 NTSP30990 170 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 SUCLG1P53597 346 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms