RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 B3GNT4Q9C0J1 378 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 RUBCNLQ9H714 662 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 AKIRIN1Q9H9L7 192 aaPredicted RBP12.5□□□□□ -0.41
VMP1-217ENST00000593168 FOLH1BQ9HBA9 442 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 PISDQ9UG56 409 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 IL17BQ9UHF5 180 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 GPC6Q9Y625 555 aaPredicted RBP12.5□□□□□ -0.41
VMP1-217ENST00000593168 V9GYQ6 96 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 A8MUA0 341 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 A8MVJ9 347 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 C9J4A7 227 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 NME6O75414 186 aaPredicted RBP12.49□□□□□ -0.41
VMP1-217ENST00000593168 STK17BO94768 372 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 MFN2O95140 757 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 TNFSF15O95150 251 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 DDAH2O95865 285 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 DLGAP3O95886 979 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 CHRM4P08173 479 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 SLC5A2P31639 672 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 MAGEA2P43356 314 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 PSG6Q00889 435 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.41
VMP1-217ENST00000593168 ZNF155Q12901 538 aaPredicted RBP12.49□□□□□ -0.41
VMP1-217ENST00000593168 GPAT3Q53EU6 434 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 FAM198BQ6UWH4 519 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 WDR53Q7Z5U6 358 aaPredicted RBP12.49□□□□□ -0.41
VMP1-217ENST00000593168 ANKRD37Q7Z713 158 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 PACS2Q86VP3 889 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 GALNT6Q8NCL4 622 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 C16orf52Q8NHV5 167 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 FAM110BQ8TC76 370 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 ZNF721Q8TF20 911 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 NRG4Q8WWG1 115 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 METTL21AQ8WXB1 218 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 PMM1Q92871 262 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 CDS1Q92903 461 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 HSH2DQ96JZ2 352 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 CCNL2Q96S94 520 aaPredicted RBP12.49□□□□□ -0.41
VMP1-217ENST00000593168 SDF2Q99470 211 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 SLC38A1Q9H2H9 487 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 SOX17Q9H6I2 414 aaPredicted RBP12.49□□□□□ -0.41
VMP1-217ENST00000593168 IL1RAPQ9NPH3 570 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 AGPAT4Q9NRZ5 378 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 C3orf18Q9UK00 162 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 BAG5Q9UL15 447 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 PADI1Q9ULC6 663 aa12.49□□□□□ -0.41
VMP1-217ENST00000593168 PTPN13Q12923 2485 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 DSPPQ9NZW4 1301 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 C9orf172C9J069 976 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 TERTO14746 1132 aaKnown RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 PCDH17O14917 1159 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 TPST1O60507 370 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 H6PDO95479 791 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 LDLRP01130 860 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 OPN1SWP03999 348 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 CCNYL3P0C7X3 344 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 GABRA3P34903 492 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 TRHRP34981 398 aaPredicted RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 VHLP40337 213 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 SLC37A1P57057 533 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 POU6F2P78424 691 aaPredicted RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 KCNJ10P78508 379 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 HPCAP84074 193 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 CHRNEQ04844 493 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 NCF4Q15080 339 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 ATP6AP1Q15904 470 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 IFI44LQ53G44 452 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 RPS26P11Q5JNZ5 115 aaPredicted RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 HMBOX1Q6NT76 420 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 C6orf15Q6UXA7 325 aaPredicted RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 SHISA6Q6ZSJ9 500 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 PIWIL3Q7Z3Z3 882 aaKnown RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 VTCN1Q7Z7D3 282 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 COX18Q8N8Q8 333 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 OR1N1Q8NGS0 311 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 SLC2A12Q8TD20 617 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 GPR151Q8TDV0 419 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 CENPNQ96H22 339 aaPredicted RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 TPD52L3Q96J77 140 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 COL21A1Q96P44 957 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 CRB3Q9BUF7 120 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 OR8D2Q9GZM6 311 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 SAP130Q9H0E3 1048 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 MTHFD2LQ9H903 347 aaPredicted RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 POLE3Q9NRF9 147 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 C19orf25Q9UFG5 118 aaPredicted RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 PPIEQ9UNP9 301 aaKnown RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 GPR55Q9Y2T6 319 aaPredicted RBP12.48□□□□□ -0.41
VMP1-217ENST00000593168 SPTA1P02549 2419 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 COL12A1Q99715 3063 aa12.48□□□□□ -0.41
VMP1-217ENST00000593168 CLOCKO15516 846 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 PEX1O43933 1283 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 DEAF1O75398 565 aaPredicted RBP12.47□□□□□ -0.41
VMP1-217ENST00000593168 STX11O75558 287 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 RAB40ALP0C0E4 278 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 CT45A8P0DMV1 189 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 CT45A9P0DMV2 189 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 CD247P20963 164 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms