RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C2orf80Q0P641 193 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 FGFBP1Q14512 234 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 SLC29A2Q14542 456 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 ZNHIT3Q15649 155 aaPredicted RBP17.08■□□□□ 0.32
CCDC43-205ENST00000592333 DECR1Q16698 335 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 CCDC153Q494R4 210 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 SPDYAQ5MJ70 313 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 FAM71E1Q6IPT2 247 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 GRAMD2AQ8IUY3 354 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 EIF1ADQ8N9N8 165 aaKnown RBP17.08■□□□□ 0.32
CCDC43-205ENST00000592333 OR4K17Q8NGC6 315 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 LINC01560Q8TB33 94 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 RDH11Q8TC12 318 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 MZB1Q8WU39 189 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 INTS12Q96CB8 462 aaKnown RBP17.08■□□□□ 0.32
CCDC43-205ENST00000592333 ZNF764Q96H86 408 aaPredicted RBP17.08■□□□□ 0.32
CCDC43-205ENST00000592333 TXLNGYQ9BZA5 131 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 ANKRA2Q9H9E1 313 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 C3orf14Q9HBI5 128 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 Q9N2J8 555 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 RRAGDQ9NQL2 400 aaPredicted RBP17.08■□□□□ 0.32
CCDC43-205ENST00000592333 FAM120CQ9NX05 1096 aaKnown RBP17.08■□□□□ 0.32
CCDC43-205ENST00000592333 GALNT8Q9NY28 637 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 PPP4R1LQ9P1A2 415 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 MPDZO75970 2070 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 SH3D21A4FU49 640 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 CASKO14936 926 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 FADS1O60427 444 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 TNFRSF21O75509 655 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 TNFSF13O75888 250 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 ATE1O95260 518 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 MYL2P10916 166 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 PRPH2P23942 346 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 NTSP30990 170 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 CCT5P48643 541 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 STARP49675 285 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 NCBP2P52298 156 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC43-205ENST00000592333 B3GALT5-AS1P59052 145 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 DNAJB13P59910 316 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 KEAP1Q14145 624 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 IMPG1Q17R60 797 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 DEFB113Q30KQ7 82 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 ZYG11AQ6WRX3 759 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 MEIOBQ8N635 442 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 KIF18AQ8NI77 898 aa17.07■□□□□ 0.32
CCDC43-205ENST00000592333 IQCGQ9H095 443 aaKnown RBP17.07■□□□□ 0.32
CCDC43-205ENST00000592333 A0A1W2PNV4 684 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 G3V2L1 256 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 UPK1AO00322 258 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 IL33O95760 270 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 HRGP04196 525 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 BTKQ06187 659 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 ZNF155Q12901 538 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-205ENST00000592333 RNF165Q6ZSG1 346 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 FRMD7Q6ZUT3 714 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 CCNYL1Q8N7R7 359 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 OR2M3Q8NG83 312 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 OR4N2Q8NGD1 307 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 EFHD2Q96C19 240 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-205ENST00000592333 ELP4Q96EB1 424 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 KCNA7Q96RP8 456 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 LMF2Q9BU23 707 aaKnown RBP17.06■□□□□ 0.32
CCDC43-205ENST00000592333 EBPLQ9BY08 206 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 DLL4Q9NR61 685 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 DDX18Q9NVP1 670 aaKnown RBP17.06■□□□□ 0.32
CCDC43-205ENST00000592333 BEX4Q9NWD9 120 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-205ENST00000592333 ZNF175Q9Y473 711 aa17.06■□□□□ 0.32
CCDC43-205ENST00000592333 SLC22A20A6NK97 555 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 GOLGA8RI6L899 631 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 UBFD1O14562 309 aaKnown RBP17.05■□□□□ 0.32
CCDC43-205ENST00000592333 JUNP05412 331 aaKnown RBP17.05■□□□□ 0.32
CCDC43-205ENST00000592333 UROSP10746 265 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 MC3RP41968 323 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 ADAM8P78325 824 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 OR5M10Q6IEU7 315 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 SH2D5Q6ZV89 423 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 P4HA3Q7Z4N8 544 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 LUZP2Q86TE4 346 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 AMDHD1Q96NU7 426 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 PIGQQ9BRB3 760 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 GLIPR2Q9H4G4 154 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 ELOVL5Q9NYP7 299 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 STOML1Q9UBI4 398 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 EMCNQ9ULC0 261 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 EIF3LQ9Y262 564 aaKnown RBP17.05■□□□□ 0.32
CCDC43-205ENST00000592333 MED12Q93074 2177 aa17.05■□□□□ 0.32
CCDC43-205ENST00000592333 NIPBLQ6KC79 2804 aaeCLIP17.04■□□□□ 0.32
CCDC43-205ENST00000592333 IGLV3-32A0A0A0MS00 114 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 TBX19O60806 448 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 CRCPO75575 148 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 TGM6O95932 706 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 CRHR1P34998 444 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 FOXA1P55317 472 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 C17orf67Q0P5P2 114 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 FOXD4Q12950 439 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-205ENST00000592333 VPS26BQ4G0F5 336 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 CFAP157Q5JU67 520 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 NOXRED1Q6NXP6 359 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 TMEM107Q6UX40 140 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms