RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SPPL2CQ8IUH8 684 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 CHERPQ8IWX8 916 aaKnown RBP10.89□□□□□ -0.67
LIG3-213ENST00000590630 CLECL1Q8IZS7 167 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 SLC16A11Q8NCK7 471 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 OR4A15Q8NGL6 344 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 RNF138Q8WVD3 245 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 STON2Q8WXE9 905 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 SLC9A6Q92581 669 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 JADE3Q92613 823 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 STACQ99469 402 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 ACTRT3Q9BYD9 372 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 DEFB127Q9H1M4 99 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 DUSP22Q9NRW4 184 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 ZIM2Q9NZV7 527 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 FAF1Q9UNN5 650 aaPredicted RBP10.89□□□□□ -0.67
LIG3-213ENST00000590630 ABCG2Q9UNQ0 655 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 HECTD1Q9ULT8 2610 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 A0A1B0GTH9 108 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 A0A1B0GVC2 190 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 OR14I1A6ND48 311 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 SNPHO15079 494 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 LRRTM2O43300 516 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 SUSD5O60279 629 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 HCN1O60741 890 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 EDF1O60869 148 aaKnown RBP10.88□□□□□ -0.67
LIG3-213ENST00000590630 PDE9AO76083 593 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 IL6P05231 212 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 RFPL3SP0C7P2 107 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 ACP2P11117 423 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 CYP4B1P13584 511 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 GDF1P27539 372 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 IL12AP29459 219 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 LCN1P31025 176 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 EVI2BP34910 448 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 PTGS2P35354 604 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 SOAT1P35610 550 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 PTGDSP41222 190 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 CA7P43166 264 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 PER3P56645 1201 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 PHC1P78364 1004 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 IRX1P78414 480 aaPredicted RBP10.88□□□□□ -0.67
LIG3-213ENST00000590630 HSF1Q00613 529 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 LASP1Q14847 261 aaKnown RBP10.88□□□□□ -0.67
LIG3-213ENST00000590630 DUSP5Q16690 384 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.88□□□□□ -0.67
LIG3-213ENST00000590630 FNDC7Q5VTL7 733 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 TIGD3Q6B0B8 471 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 CDC73Q6P1J9 531 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 ANKRD46Q86W74 232 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 MIER2Q8N344 545 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 COX18Q8N8Q8 333 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 OR1J4Q8NGS1 313 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 OR5AK3PQ8NH89 298 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 FBXO30Q8TB52 745 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 PIK3R3Q92569 461 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 RELTQ969Z4 430 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 DTNBP1Q96EV8 351 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 RMND5BQ96G75 393 aaPredicted RBP10.88□□□□□ -0.67
LIG3-213ENST00000590630 C16orf58Q96GQ5 468 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 MARK4Q96L34 752 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 CCDC115Q96NT0 180 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 OR52E6Q96RD3 313 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 SIKE1Q9BRV8 207 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 G6PC3Q9BUM1 346 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 CCDC28BQ9BUN5 200 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 UBQLN3Q9H347 655 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 PIGUQ9H490 435 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 GALNT9Q9HCQ5 603 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 ACKR4Q9NPB9 350 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 GPATCH2Q9NW75 528 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 BTNL2Q9UIR0 455 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 ERRFI1Q9UJM3 462 aaPredicted RBP10.88□□□□□ -0.67
LIG3-213ENST00000590630 C15orf41Q9Y2V0 281 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 PCDHGB3Q9Y5G1 929 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 WIF1Q9Y5W5 379 aa10.88□□□□□ -0.67
LIG3-213ENST00000590630 PHF3Q92576 2039 aaKnown RBP10.87□□□□□ -0.67
LIG3-213ENST00000590630 ICE1Q9Y2F5 2266 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 TRGV8A0A0C4DH27 118 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 RNF103-CHMP3A0A140T963 221 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 GXYLT2A0PJZ3 443 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 AQP7O14520 342 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 PRRG2O14669 202 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 KCNK2O95069 426 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 CELA3AP09093 270 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 UQCRC2P22695 453 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 PTPN6P29350 595 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 RFX3P48380 749 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 MRPL19P49406 292 aaKnown RBP10.87□□□□□ -0.67
LIG3-213ENST00000590630 CLK3P49761 638 aaKnown RBP10.87□□□□□ -0.67
LIG3-213ENST00000590630 DGKQP52824 942 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 STX1BP61266 288 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 C1QL3Q5VWW1 255 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 MTFR2Q6P444 385 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 ANGPTL8Q6UXH0 198 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 TRILQ7L0X0 811 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 FGD2Q7Z6J4 655 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 TRIML2Q8N7C3 387 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 GOT1L1Q8NHS2 421 aaPredicted RBP10.87□□□□□ -0.67
LIG3-213ENST00000590630 FAM57AQ8TBR7 257 aa10.87□□□□□ -0.67
LIG3-213ENST00000590630 FAM110BQ8TC76 370 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms