RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 NPSR1Q6W5P4 371 aa20.63■□□□□ 0.89
ATG4D-209ENST00000588857 FRRS1Q6ZNA5 592 aa20.63■□□□□ 0.89
ATG4D-209ENST00000588857 AMIGO2Q86SJ2 522 aa20.63■□□□□ 0.89
ATG4D-209ENST00000588857 TMEM102Q8N9M5 508 aaPredicted RBP20.63■□□□□ 0.89
ATG4D-209ENST00000588857 PROX1Q92786 737 aa20.63■□□□□ 0.89
ATG4D-209ENST00000588857 GAL3ST4Q96RP7 486 aa20.63■□□□□ 0.89
ATG4D-209ENST00000588857 SEMA6AQ9H2E6 1030 aa20.63■□□□□ 0.89
ATG4D-209ENST00000588857 CBLCQ9ULV8 474 aa20.63■□□□□ 0.89
ATG4D-209ENST00000588857 LOC102723996A0A087X1L8 192 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 STMND1H3BQB6 276 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 DEAF1O75398 565 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-209ENST00000588857 ATP6V1C1P21283 382 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 DRD5P21918 477 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 RFX3P48380 749 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 GPR143P51810 404 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 GPR68Q15743 365 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 ATP6AP1Q15904 470 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 DUSP7Q16829 419 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 PEX5LQ8IYB4 626 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 NFAM1Q8NET5 270 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-209ENST00000588857 OR4N2Q8NGD1 307 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 GEMIN6Q8WXD5 167 aaKnown RBP20.62■□□□□ 0.89
ATG4D-209ENST00000588857 PMM1Q92871 262 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 CENPNQ96H22 339 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-209ENST00000588857 LCORQ96JN0 433 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-209ENST00000588857 WDR77Q9BQA1 342 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-209ENST00000588857 G6PC3Q9BUM1 346 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 PPIEQ9UNP9 301 aaKnown RBP20.62■□□□□ 0.89
ATG4D-209ENST00000588857 FARSAQ9Y285 508 aaKnown RBP20.62■□□□□ 0.89
ATG4D-209ENST00000588857 SH3GLB1Q9Y371 365 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 ASPMQ8IZT6 3477 aa20.62■□□□□ 0.89
ATG4D-209ENST00000588857 CLOCKO15516 846 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 ZIC2O95409 532 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-209ENST00000588857 CST1P01037 141 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 SEMG1P04279 462 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 FESP07332 822 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 CD247P20963 164 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 GCKP35557 465 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 PIGAP37287 484 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 KCNJ5P48544 419 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 EBPQ15125 230 aaKnown RBP20.61■□□□□ 0.89
ATG4D-209ENST00000588857 CYP27C1Q4G0S4 372 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 ZNF311Q5JNZ3 666 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 HMBOX1Q6NT76 420 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 HMGN2P46Q86SG4 172 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 C9orf40Q8IXQ3 194 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 ZNF619Q8N2I2 560 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 NRG4Q8WWG1 115 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 VMP1Q96GC9 406 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 BDH2Q9BUT1 245 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 SEMA4CQ9C0C4 833 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 WWTR1Q9GZV5 400 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 SAP130Q9H0E3 1048 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 QRSL1Q9H0R6 528 aaKnown RBP20.61■□□□□ 0.89
ATG4D-209ENST00000588857 TCFL5Q9UL49 500 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 ZNF232Q9UNY5 417 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 IFT52Q9Y366 437 aa20.61■□□□□ 0.89
ATG4D-209ENST00000588857 FRG2CA6NGY1 282 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 hCG_2039718K7EN88 272 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 CASQ2O14958 399 aaPredicted RBP20.6■□□□□ 0.89
ATG4D-209ENST00000588857 GUSBP08236 651 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 PABPC4LP0CB38 370 aaKnown RBP20.6■□□□□ 0.89
ATG4D-209ENST00000588857 MMP11P24347 488 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 STAT5AP42229 794 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 MAGEA2P43356 314 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 HSDL2Q6YN16 418 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 OR52P1PQ8NH57 321 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 ADIPOR1Q96A54 375 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 GPR87Q9BY21 358 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 NXF5Q9H1B4 397 aaKnown RBP20.6■□□□□ 0.89
ATG4D-209ENST00000588857 VCX3BQ9H321 246 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 FBXO34Q9NWN3 711 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 DNAJB9Q9UBS3 223 aa20.6■□□□□ 0.89
ATG4D-209ENST00000588857 C21orf140B9A014 251 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 GNGT2O14610 69 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 KIAA0513O60268 411 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 RAD1O60671 282 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 CD82P27701 267 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 VHLP40337 213 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 OR1E2P47887 323 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 SLC26A5P58743 744 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 VLDLRP98155 873 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 LARS2Q15031 903 aaKnown RBP20.59■□□□□ 0.89
ATG4D-209ENST00000588857 DECR1Q16698 335 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 LPCAT4Q643R3 524 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 PIWIL3Q7Z3Z3 882 aaKnown RBP20.59■□□□□ 0.89
ATG4D-209ENST00000588857 BCORP1Q8N888 145 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 APCDD1LQ8NCL9 501 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 GPR32P1Q8NGA4 272 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 ZG16BQ96DA0 208 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 ZNF354BQ96LW1 612 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 PINK1Q9BXM7 581 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 MRTO4Q9UKD2 239 aaKnown RBP20.59■□□□□ 0.89
ATG4D-209ENST00000588857 SLC13A4Q9UKG4 626 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 HS3ST3B1Q9Y662 390 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 AHCTF1Q8WYP5 2266 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 AGAP5A6NIR3 686 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 DBIP07108 87 aaKnown RBP20.59■□□□□ 0.89
ATG4D-209ENST00000588857 IL7RP16871 459 aa20.59■□□□□ 0.89
ATG4D-209ENST00000588857 ITGA2P17301 1181 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms