RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SEMA3DO95025 777 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 OXSR1O95747 527 aaPredicted RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 EIF2S1P05198 315 aaKnown RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 OSMP13725 252 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 SPNP16150 400 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 DDCP20711 480 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 SSX1Q16384 188 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 MEDAGQ5VYS4 303 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 SLX4IPQ5VYV7 408 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 AKAP14Q86UN6 197 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 AMIGO1Q86WK6 493 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 MMP21Q8N119 569 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 OR5P2Q8WZ92 322 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 PIK3R3Q92569 461 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 RAD51AP1Q96B01 352 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 TRNT1Q96Q11 434 aaKnown RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 UCK2Q9BZX2 261 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 ROGDIQ9GZN7 287 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 SEMA6CQ9H3T2 930 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 HRASLS2Q9NWW9 162 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 AHSPQ9NZD4 102 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 REV1Q9UBZ9 1251 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 WBP11Q9Y2W2 641 aaKnown RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 LSM2Q9Y333 95 aaKnown RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 KNTC1P50748 2209 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 C5orf58C9J3I9 102 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 SNPHO15079 494 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 CAPN5O15484 640 aaPredicted RBP13.69□□□□□ -0.22
CCDC43-203ENST00000588210 ALOX12P18054 663 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 ENDOUP21128 410 aaKnown RBP13.69□□□□□ -0.22
CCDC43-203ENST00000588210 CAMK2BQ13554 666 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 DOC2BQ14184 412 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 BCL2A1Q16548 175 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 RPS26P11Q5JNZ5 115 aaPredicted RBP13.69□□□□□ -0.22
CCDC43-203ENST00000588210 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 ATAD3BQ5T9A4 648 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 FAM129CQ86XR2 697 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 MARCH9Q86YJ5 346 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 KRT78Q8N1N4 520 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 HORMAD2Q8N7B1 307 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 SLC35B4Q969S0 331 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 ZDHHC12Q96GR4 267 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 LIN37Q96GY3 246 aaPredicted RBP13.69□□□□□ -0.22
CCDC43-203ENST00000588210 OPALINQ96PE5 141 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 CCDC32Q9BV29 185 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 SORBS1Q9BX66 1292 aaKnown RBP13.69□□□□□ -0.22
CCDC43-203ENST00000588210 TMCC3Q9ULS5 477 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 MGAT4BQ9UQ53 548 aa13.69□□□□□ -0.22
CCDC43-203ENST00000588210 OR6C74A6NCV1 312 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 FAM227AF5H4B4 570 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 FAAHO00519 579 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 TOX3O15405 576 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-203ENST00000588210 PDE9AO76083 593 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 MFN2O95140 757 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 SCG5P05408 212 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 BCHEP06276 602 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 ELAVL4P26378 380 aaKnown RBP13.68□□□□□ -0.22
CCDC43-203ENST00000588210 DEFA1P59665 94 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 DEFA3P59666 94 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 EIF3IQ13347 325 aaKnown RBP13.68□□□□□ -0.22
CCDC43-203ENST00000588210 KCNJ8Q15842 424 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 PHF19Q5T6S3 580 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 C12orf73Q69YU5 71 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 DESI1Q6ICB0 168 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 ARMC6Q6NXE6 501 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 GPR32P1Q8NGA4 272 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 SLC38A5Q8WUX1 472 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 TMEM19Q96HH6 336 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 CCDC74BQ96LY2 380 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 ZNF717Q9BY31 904 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-203ENST00000588210 NRSN2Q9GZP1 204 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 RHBGQ9H310 441 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 TMEM165Q9HC07 324 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 NEUROD4Q9HD90 331 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 SLAMF7Q9NQ25 335 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 OR6C2Q9NZP2 312 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 CRNNQ9UBG3 495 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-203ENST00000588210 SNX8Q9Y5X2 465 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 CCDC187A0A096LP49 1063 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 PLPP1O14494 284 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 ENTPD6O75354 484 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 GPX5O75715 221 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 CSTF2P33240 577 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC43-203ENST00000588210 RAB28P51157 221 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 ADGRF3Q8IZF5 1079 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 RAB42Q8N4Z0 105 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 TGM7Q96PF1 710 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 CMKLR1Q99788 373 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 RAB11FIP5Q9BXF6 653 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 NUAK2Q9H093 628 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 HHATLQ9HCP6 504 aa13.68□□□□□ -0.22
CCDC43-203ENST00000588210 AKAP7Q9P0M2 348 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-203ENST00000588210 PDPK1O15530 556 aa13.67□□□□□ -0.22
CCDC43-203ENST00000588210 TBX6O95947 436 aaPredicted RBP13.67□□□□□ -0.22
CCDC43-203ENST00000588210 DDX5P17844 614 aaKnown RBP13.67□□□□□ -0.22
CCDC43-203ENST00000588210 POU1F1P28069 291 aa13.67□□□□□ -0.22
CCDC43-203ENST00000588210 GFERP55789 205 aa13.67□□□□□ -0.22
CCDC43-203ENST00000588210 RPS26P62854 115 aaKnown RBP13.67□□□□□ -0.22
CCDC43-203ENST00000588210 SEC23BQ15437 767 aa13.67□□□□□ -0.22
CCDC43-203ENST00000588210 DCST1Q5T197 706 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms