RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 KIR2DL2P43627 348 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-205ENST00000587888 KCNJ5P48544 419 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 HTR6P50406 440 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 SUCLG1P53597 346 aaKnown RBP12.78□□□□□ -0.36
ERCC1-205ENST00000587888 CLDN15P56746 228 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 MRPS22P82650 360 aaKnown RBP12.78□□□□□ -0.36
ERCC1-205ENST00000587888 PSG6Q00889 435 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 C2orf80Q0P641 193 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF155Q12901 538 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-205ENST00000587888 PRSS53Q2L4Q9 553 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 SPIN4Q56A73 249 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 SPDYAQ5MJ70 313 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 LGSNQ5TDP6 509 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 RAET1LQ5VY80 246 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF474Q6S9Z5 364 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-205ENST00000587888 MEIOBQ8N635 442 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 GBP7Q8N8V2 638 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF610Q8N9Z0 462 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 OR2M3Q8NG83 312 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 ZC3HAV1LQ96H79 300 aaKnown RBP12.78□□□□□ -0.36
ERCC1-205ENST00000587888 TMEM237Q96Q45 408 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 KCNA7Q96RP8 456 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF382Q96SR6 550 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 FMO2Q99518 471 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 SLC39A3Q9BRY0 314 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 MED18Q9BUE0 208 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 PINK1Q9BXM7 581 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 UBTD1Q9HAC8 227 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 SDHAF3Q9NRP4 125 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 ZNF226Q9NYT6 803 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 FLRT3Q9NZU0 649 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 ACANP16112 2415 aa12.78□□□□□ -0.36
ERCC1-205ENST00000587888 ANKHD1Q8IWZ3 2542 aaKnown RBP12.78□□□□□ -0.36
ERCC1-205ENST00000587888 DEFB108AA8MXU0 73 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 SIAH2O43255 324 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 GMFGO60234 142 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 LY6G6DO95868 133 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 POU2F1P14859 743 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 TIA1P31483 386 aaKnown RBP eCLIP12.77□□□□□ -0.37
ERCC1-205ENST00000587888 MC3RP41968 323 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 RFX3P48380 749 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 NCBP2P52298 156 aaKnown RBP eCLIP12.77□□□□□ -0.37
ERCC1-205ENST00000587888 EEFSECP57772 596 aaKnown RBP12.77□□□□□ -0.37
ERCC1-205ENST00000587888 PSPHP78330 225 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 Q5PR19 223 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 ANKRD34AQ69YU3 496 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 ZNF550Q7Z398 422 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 MARCH3Q86UD3 253 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 DUSP19Q8WTR2 217 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 RNF138Q8WVD3 245 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 ZNF592Q92610 1267 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 PIGTQ969N2 578 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 ZNF845Q96IR2 970 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-205ENST00000587888 RTN4RQ9BZR6 473 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 STMN4Q9H169 189 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-205ENST00000587888 NFU1Q9UMS0 254 aa12.77□□□□□ -0.37
ERCC1-205ENST00000587888 ZNF469Q96JG9 3925 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-205ENST00000587888 EXOC1LA0A1B0GW35 172 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 MYO1GB0I1T2 1018 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 H3BML4 177 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 C16orf97H3BN30 126 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 GOLGA8RI6L899 631 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 SMAD7O15105 426 aaKnown RBP12.76□□□□□ -0.37
ERCC1-205ENST00000587888 FADS1O60427 444 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 TNFRSF21O75509 655 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 ATP5F1P24539 256 aaPredicted RBP12.76□□□□□ -0.37
ERCC1-205ENST00000587888 UGT2B10P36537 528 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 ACKR1Q16570 336 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 DECR1Q16698 335 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 CYP27C1Q4G0S4 372 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 TMEM107Q6UX40 140 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 CIARTQ8N365 385 aaPredicted RBP12.76□□□□□ -0.37
ERCC1-205ENST00000587888 MMGT1Q8N4V1 131 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 FADS6Q8N9I5 356 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 FNDC9Q8TBE3 224 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 Q96MF0 132 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 KLHL4Q9C0H6 718 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 PTGES2Q9H7Z7 377 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 ELOVL5Q9NYP7 299 aa12.76□□□□□ -0.37
ERCC1-205ENST00000587888 NIPBLQ6KC79 2804 aaeCLIP12.75□□□□□ -0.37
ERCC1-205ENST00000587888 CCDC151A5D8V7 595 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 H7C1Q1 480 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 UPK1AO00322 258 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 EMC8O43402 210 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 COQ9O75208 318 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 CGAP01215 116 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 ENO1P06733 434 aaKnown RBP12.75□□□□□ -0.37
ERCC1-205ENST00000587888 HEXAP06865 529 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 DDCP20711 480 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 FPR1P21462 350 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 CRYGSP22914 178 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 CLK3P49761 638 aaKnown RBP12.75□□□□□ -0.37
ERCC1-205ENST00000587888 PRKAA2P54646 552 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 PKNOX1P55347 436 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 CLDN20P56880 219 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 PON3Q15166 354 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 SGCBQ16585 318 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 EXOC3L2Q2M3D2 409 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 PPP4R4Q6NUP7 873 aa12.75□□□□□ -0.37
ERCC1-205ENST00000587888 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms