RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 UGT2B11O75310 529 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 KCNK2O95069 426 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 THBS1P07996 1170 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 CSTF2P33240 577 aaKnown RBP eCLIP18.43■□□□□ 0.54
TRIM47-204ENST00000587339 NSDHLQ15738 373 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 PPP1R3BQ86XI6 285 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 TMEM151BQ8IW70 566 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 CLIP4Q8N3C7 705 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 ZNF615Q8N8J6 731 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 SLC38A9Q8NBW4 561 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 OR9Q2Q8NGE9 314 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 RHBDD1Q8TEB9 315 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 PMM1Q92871 262 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 SENP5Q96HI0 755 aaPredicted RBP18.43■□□□□ 0.54
TRIM47-204ENST00000587339 ARHGDIGQ99819 225 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 FNDC11Q9BVV2 318 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 GRIP2Q9C0E4 1043 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 ZNF556Q9HAH1 456 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 CTSFQ9UBX1 484 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 MKL2Q9ULH7 1088 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 GPR55Q9Y2T6 319 aaPredicted RBP18.43■□□□□ 0.54
TRIM47-204ENST00000587339 TRBV4-1A0A0J9YWV2 114 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 H3BNH8 94 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 FLRT2O43155 660 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 DBIP07108 87 aaKnown RBP18.43■□□□□ 0.54
TRIM47-204ENST00000587339 CYP4B1P13584 511 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 RFX3P48380 749 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 DCST1Q5T197 706 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 THAP5Q7Z6K1 395 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 OR7G1Q8NGA0 311 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 PRRC1Q96M27 445 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 PSD2Q9BQI7 771 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 ING2Q9H160 280 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 Q9N2J8 555 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 PAPOLBQ9NRJ5 636 aaKnown RBP18.43■□□□□ 0.54
TRIM47-204ENST00000587339 PRODH2Q9UF12 536 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 NINQ8N4C6 2090 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 CENPVL1A0A0U1RR11 272 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 TCRBV16S1A1N1A0A5B0 115 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 ARRDC5A6NEK1 342 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 CLDN24A6NM45 220 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 BCKDKO14874 412 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 FRS3O43559 492 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 GP1BAP07359 652 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 ELAVL4P26378 380 aaKnown RBP18.42■□□□□ 0.54
TRIM47-204ENST00000587339 TRA2AQ13595 282 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM47-204ENST00000587339 ELAVL1Q15717 326 aaKnown RBP18.42■□□□□ 0.54
TRIM47-204ENST00000587339 NPTX1Q15818 432 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 EIPR1Q53HC9 387 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 ZNF836Q6ZNA1 936 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 COX15Q7KZN9 410 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 LAPTM4BQ86VI4 370 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 FKBP10Q96AY3 582 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 VN1R1Q9GZP7 353 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 SLC22A11Q9NSA0 550 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 OCIAD1Q9NX40 245 aa18.42■□□□□ 0.54
TRIM47-204ENST00000587339 WDR87Q6ZQQ6 2873 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 A0A1W2PRQ8 180 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 DPPA5A6NC42 116 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 A8MUA0 341 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 PEX12O00623 359 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 RPS4Y1P22090 263 aaKnown RBP18.41■□□□□ 0.54
TRIM47-204ENST00000587339 ACP1P24666 158 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 EFNA3P52797 238 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 RGS8P57771 180 aaPredicted RBP18.41■□□□□ 0.54
TRIM47-204ENST00000587339 NPRL3Q12980 569 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 IL18R1Q13478 541 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 DGCR6Q14129 220 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 MAPK14Q16539 360 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 NKAIN1Q4KMZ8 207 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 LIN52Q52LA3 116 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 B3GNT8Q7Z7M8 397 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 OR4N2Q8NGD1 307 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 NIPSNAP1Q9BPW8 284 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 TGIF2Q9GZN2 237 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 APMAPQ9HDC9 416 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 POFUT2Q9Y2G5 429 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 PCDHGA8Q9Y5G5 932 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 SEC16AO15027 2179 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 NPIPA5A0A0B4J1W7 369 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 FAM86C2PA6NEL3 165 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 TTC36A6NLP5 189 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 NPIPA7E9PJI5 369 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 GALR2O43603 387 aaPredicted RBP18.41■□□□□ 0.54
TRIM47-204ENST00000587339 TPST2O60704 377 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 HBQ1P09105 142 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 SMIM18P0DKX4 95 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 NPIPA8P0DM63 369 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 CT45A8P0DMV1 189 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 CT45A9P0DMV2 189 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 NID1P14543 1247 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 TRHRP34981 398 aaPredicted RBP18.41■□□□□ 0.54
TRIM47-204ENST00000587339 RORAP35398 523 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 EEF1A1P68104 462 aaKnown RBP18.41■□□□□ 0.54
TRIM47-204ENST00000587339 OCA2Q04671 838 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 ZFP36L1Q07352 338 aaKnown RBP18.41■□□□□ 0.54
TRIM47-204ENST00000587339 KEAP1Q14145 624 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 FLYWCH1Q4VC44 716 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 CT45A2Q5DJT8 189 aa18.41■□□□□ 0.54
TRIM47-204ENST00000587339 ZNF691Q5VV52 312 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms