RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 BEST3Q8N1M1 668 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 METTL25Q8N6Q8 603 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ANKFN1Q8N957 763 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 C11orf65Q8NCR3 313 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 OR52N2Q8NGI0 321 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ZFP90Q8TF47 636 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 CANT1Q8WVQ1 401 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 NRG4Q8WWG1 115 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 FIG4Q92562 907 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 NRGNQ92686 78 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 NACC2Q96BF6 587 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 MS4A6EQ96DS6 147 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 MMABQ96EY8 250 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 CENPNQ96H22 339 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 F2RL3Q96RI0 385 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 NR1H4Q96RI1 486 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 SERINC2Q96SA4 455 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 SLC35A5Q9BS91 424 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 INPP5KQ9BT40 448 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ZNF717Q9BY31 904 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 TMEM38AQ9H6F2 299 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 STMN3Q9NZ72 180 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ABI3Q9P2A4 366 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 MKL2Q9ULH7 1088 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 RAB26Q9ULW5 256 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 IGLV3-12A0A075B6K2 115 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 OR5H15A6NDH6 313 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 NPIPA5E9PKD4 350 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 SAP18O00422 153 aaKnown RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 FOXS1O43638 330 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 B3GALT2O43825 422 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 PRAMEF2O60811 474 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 SH3BGRLO75368 114 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 PDE9AO76083 593 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 IFI6P09912 130 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 FAM58BPP0C7Q3 252 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 PCGF2P35227 344 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 CDKN2CP42773 168 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 ALDH9A1P49189 494 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 ERFP50548 548 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 NR0B1P51843 470 aaKnown RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 MANFP55145 182 aaKnown RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 OR4D2P58180 307 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 MRPS35P82673 323 aaKnown RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 PLIN5Q00G26 463 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 EPS8Q12929 822 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 MED21Q13503 144 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 GNA13Q14344 377 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 GK3PQ14409 553 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 ATP6AP1Q15904 470 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 FAM214AQ32MH5 1076 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 ZNF766Q5HY98 468 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 GCNT6Q5T4J0 391 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 MFSD4BQ5TF39 518 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 YOD1Q5VVQ6 348 aaPredicted RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 SPINK14Q6IE38 97 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 ANGPTL8Q6UXH0 198 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 TMEM64Q6YI46 380 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 SVOPLQ8N434 492 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 ARHGEF39Q8N4T4 335 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 CSNK1A1LQ8N752 337 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 ACOT4Q8N9L9 421 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 C7orf57Q8NEG2 295 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 PSMA8Q8TAA3 256 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 SFXN5Q8TD22 340 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 RASSF5Q8WWW0 418 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 LZICQ8WZA0 190 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 TM4SF18Q96CE8 201 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 SLC47A1Q96FL8 570 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 RDH12Q96NR8 316 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 PKP2Q99959 881 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 OSBPL11Q9BXB4 747 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 RBCK1Q9BYM8 510 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 RUBCNLQ9H714 662 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 RPF2Q9H7B2 306 aaKnown RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 CLK4Q9HAZ1 481 aaKnown RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 CHST11Q9NPF2 352 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 BATF3Q9NR55 127 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 DCAF13Q9NV06 445 aaKnown RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 ADPRHL2Q9NX46 363 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 BAG5Q9UL15 447 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 NPIPA1Q9UND3 350 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 FAF1Q9UNN5 650 aaPredicted RBP7.26□□□□□ -1.25
VMP1-204ENST00000587259 ANGPT4Q9Y264 503 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 SCN2AQ99250 2005 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 CPAMD8Q8IZJ3 1885 aa7.26□□□□□ -1.25
VMP1-204ENST00000587259 NCOA6Q14686 2063 aaPredicted RBP7.25□□□□□ -1.25
VMP1-204ENST00000587259 RNF103-CHMP3A0A140T963 221 aa7.25□□□□□ -1.25
VMP1-204ENST00000587259 LCMT2O60294 686 aaKnown RBP7.25□□□□□ -1.25
VMP1-204ENST00000587259 SRPX2O60687 465 aaPredicted RBP7.25□□□□□ -1.25
VMP1-204ENST00000587259 C6orf47O95873 294 aa7.25□□□□□ -1.25
VMP1-204ENST00000587259 TBX6O95947 436 aaPredicted RBP7.25□□□□□ -1.25
VMP1-204ENST00000587259 GSNP06396 782 aa7.25□□□□□ -1.25
VMP1-204ENST00000587259 NR2F6P10588 404 aa7.25□□□□□ -1.25
VMP1-204ENST00000587259 UQCRBP14927 111 aa7.25□□□□□ -1.25
VMP1-204ENST00000587259 NCK1P16333 377 aa7.25□□□□□ -1.25
VMP1-204ENST00000587259 ATP5A1P25705 553 aaKnown RBP7.25□□□□□ -1.25
VMP1-204ENST00000587259 PPP2R1BP30154 601 aa7.25□□□□□ -1.25
VMP1-204ENST00000587259 MPIP34949 423 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms