RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 CH25HO95992 272 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GPR89BP0CG08 455 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ACP5P13686 325 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HOXB3P14651 431 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CSNK2A2P19784 350 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FPR3P25089 353 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PTBP1P26599 531 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MAP2K3P46734 347 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 EVX1P49640 407 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PLET1Q6UQ28 207 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRIM48Q8IWZ4 208 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C19orf18Q8NEA5 215 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR2L5Q8NG80 312 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ACOT11Q8WXI4 607 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SUSD6Q92537 303 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF707Q96C28 371 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRMT61BQ9BVS5 477 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HDHD5Q9BXW7 423 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 BTBD1Q9H0C5 482 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MED17Q9NVC6 651 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RBFOX1Q9NWB1 397 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CALML5Q9NZT1 146 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 EXOGQ9Y2C4 368 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PROM1O43490 865 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CHST10O43529 356 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NFATC1O95644 943 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 IGHA1P01876 353 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 F3P13726 295 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CELP19835 753 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PKLRP30613 574 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 IFNA8P32881 189 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MPIP34949 423 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MC3RP41968 323 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 STAT5AP42229 794 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 IL12RB1P42701 662 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ARFIP1P53367 373 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RIN1Q13671 783 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 P2RY14Q15391 338 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DECR1Q16698 335 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRIQKQ629K1 86 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NKAIN4Q8IVV8 208 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DUSP18Q8NEJ0 188 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NUP43Q8NFH3 380 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR2L8Q8NGY9 312 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NEIL3Q8TAT5 605 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SPPL3Q8TCT6 385 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GIMAP1Q8WWP7 306 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ELP4Q96EB1 424 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CHFRQ96EP1 664 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TMED9Q9BVK6 235 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TEX12Q9BXU0 123 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OSGEPL1Q9H4B0 414 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TBC1D17Q9HA65 648 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MRPS30Q9NP92 439 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZDHHC4Q9NPG8 344 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 EQTNQ9NQ60 294 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PRSS16Q9NQE7 514 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 IMP3Q9NV31 184 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PRKAG2Q9UGJ0 569 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PRELID1Q9Y255 219 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR1A2Q9Y585 309 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SHISA3A0PJX4 238 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GABRPO00591 440 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 KLF4O43474 513 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CCNYL3P0C7X3 344 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PRKAR1BP31321 381 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 AVPR1BP47901 424 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CD83Q01151 205 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CEBPEQ15744 281 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF438Q7Z4V0 828 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 KLHL36Q8N4N3 616 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR52N1Q8NH53 320 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SMG7Q92540 1137 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 BEX2Q9BXY8 128 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CRISPLD2Q9H0B8 497 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C11orf49Q9H6J7 331 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SLA2Q9H6Q3 261 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SYNDIG1Q9H7V2 258 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SLC6A20Q9NP91 592 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 B3GAT2Q9NPZ5 323 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MBNL1Q9NR56 388 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 POLHQ9Y253 713 aa13.29□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ANTXRLA6NF34 631 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FAM157BP0CG42 384 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ALAS2P22557 587 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CFL1P23528 166 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CERS1P27544 350 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HTR1FP30939 366 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CTNNB1P35222 781 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DRD3P35462 400 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 AHRP35869 848 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 EIF2B5Q13144 721 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TATDN3Q17R31 274 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 YIF1BQ5BJH7 314 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 VASNQ6EMK4 673 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MARCH9Q86YJ5 346 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TCTE3Q8IZS6 198 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR9A2Q8NGT5 310 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DNAJA4Q8WW22 397 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms