RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 ANKRA2Q9H9E1 313 aa15.29■□□□□ 0.04
CSNK1D-225ENST00000584913 SLC24A3Q9HC58 644 aa15.29■□□□□ 0.04
CSNK1D-225ENST00000584913 NEUROD4Q9HD90 331 aa15.29■□□□□ 0.04
CSNK1D-225ENST00000584913 SDHAF3Q9NRP4 125 aa15.29■□□□□ 0.04
CSNK1D-225ENST00000584913 FAM120CQ9NX05 1096 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-225ENST00000584913 RNF6Q9Y252 685 aa15.29■□□□□ 0.04
CSNK1D-225ENST00000584913 ZNF407Q9C0G0 2248 aa15.29■□□□□ 0.04
CSNK1D-225ENST00000584913 ZNHIT1O43257 154 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 PEX11AO75192 247 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 NKX2-2O95096 273 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 KCNH1O95259 989 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 CPN1P15169 458 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 PRPS1L1P21108 318 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 SRD5A2P31213 254 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 GPC1P35052 558 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 GAS1P54826 345 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 NUP107P57740 925 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 PRR5P85299 388 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 HSPB3Q12988 150 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 EXOSC6Q5RKV6 272 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 RTL6Q6ICC9 239 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 ZNF585AQ6P3V2 769 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 LACC1Q8IV20 430 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 FAM83FQ8NEG4 500 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 MOAP1Q96BY2 351 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 COQ8BQ96D53 544 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 TIMP4Q99727 224 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 NOP53Q9NZM5 478 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 SH3BP4Q9P0V3 963 aa15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 EIF3LQ9Y262 564 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-225ENST00000584913 C15orf38-AP3S2A0A0A6YYH1 394 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 LINC01387J3KSC0 135 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 GNB5O14775 395 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 EMC8O43402 210 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 SKAP2O75563 359 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 TRAPPC6AO75865 159 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 EPPINO95925 133 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 GLI4P10075 376 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 COX6B1P14854 86 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 IGFBP2P18065 325 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 GRNP28799 593 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 EVI2BP34910 448 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 TIMP3P35625 211 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 CLK3P49761 638 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 RPL14P50914 215 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 SLC25A35Q3KQZ1 300 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 ENPP6Q6UWR7 440 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 ZNF551Q7Z340 670 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 RIMKLAQ8IXN7 391 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 WDSUB1Q8N9V3 476 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 OR5M9Q8NGP3 310 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 AGR3Q8TD06 166 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 OR5P2Q8WZ92 322 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 GFM2Q969S9 779 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 TUBGCP3Q96CW5 907 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 C3orf30Q96M34 536 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 BHLHE41Q9C0J9 482 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 GALNT9Q9HCQ5 603 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 BAIAP2L1Q9UHR4 511 aa15.27■□□□□ 0.04
CSNK1D-225ENST00000584913 DNAJC13O75165 2243 aa15.27■□□□□ 0.03
CSNK1D-225ENST00000584913 NCKAP5O14513 1909 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 IGLV3-32A0A0A0MS00 114 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 CD8B2A6NJW9 211 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 HSPB2A8KAH6 182 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 AKAP10O43572 662 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 FADS1O60427 444 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 KRT16P08779 473 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 CYP4B1P13584 511 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 CHMP24386 653 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 PEX19P40855 299 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 ZFP36L2P47974 494 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 SLC1A6P48664 564 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 PRIM2P49643 509 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 CLDN8P56748 225 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 TFF3Q07654 80 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 PMPCAQ10713 525 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 GAB1Q13480 694 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 CDSNQ15517 529 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 HSPB2Q16082 182 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 LSM12Q3MHD2 195 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 ACSF3Q4G176 576 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 IL23RQ5VWK5 629 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 CES4AQ5XG92 561 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 NSUN5P2Q63ZY6 315 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 MFSD12Q6NUT3 480 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 AAGABQ6PD74 315 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 NCCRP1Q6ZVX7 275 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 GDF7Q7Z4P5 450 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 TRIM42Q8IWZ5 723 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 RPRMLQ8N4K4 120 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 ZNF781Q8N8C0 355 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 FADS6Q8N9I5 356 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 NUP43Q8NFH3 380 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 ZPLD1Q8TCW7 415 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 SFXN5Q8TD22 340 aa15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 ABTB1Q969K4 478 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 CIDECQ96AQ7 238 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-225ENST00000584913 EFHD2Q96C19 240 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms