RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ARRB1P49407 418 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ACOT2P49753 483 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ART1P52961 327 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 RPS21P63220 83 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CX3CL1P78423 397 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ASPHQ12797 758 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 DNAJC3Q13217 504 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 EIF4EBP2Q13542 120 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TMED2Q15363 201 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 C10orf120Q5SQS8 335 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 OR4A47Q6IF82 309 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 Q71RC1 249 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CHMP1BQ7LBR1 199 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SSX8Q7RTT4 187 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM9CQ8IZT9 166 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 RBFAQ8N0V3 343 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 MTURNQ8N3F0 131 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 GCSAMQ8N6F7 178 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 NATD1Q8N6N6 113 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 THAP8Q8NA92 274 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ICA1LQ8NDH6 482 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 LMO3Q8TAP4 145 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TRPC4APQ8TEL6 797 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SLCO2A1Q92959 643 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM46BQ96A09 425 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TADA1Q96BN2 335 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 PDLIM5Q96HC4 596 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ZIM3Q96PE6 472 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 RAB33BQ9H082 229 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 YY1AP1Q9H869 796 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SP140LQ9H930 580 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC40Q9H9A6 602 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 PCDH9Q9HC56 1237 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 NINJ2Q9NZG7 142 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 BCAP29Q9UHQ4 241 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 LAMP5Q9UJQ1 280 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 MRPS7Q9Y2R9 242 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CPQQ9Y646 472 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 DMXL1Q9Y485 3027 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 EVPLQ92817 2033 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SHROOM3Q8TF72 1996 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SMCHD1A6NHR9 2005 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A087WZY1 265 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MACROD2A1Z1Q3 448 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HHLA1C9JL84 531 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PLOD2O00469 737 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SOCS6O14544 535 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 B4GALT5O43286 388 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 KIAA0754O94854 1291 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 IVLP07476 585 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SERPINF2P08697 491 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GM2AP17900 193 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CCNA2P20248 432 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PSMB4P28070 264 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPH1P31943 449 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC26A3P40879 764 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MAGEA8P43361 318 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPH2P55795 449 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CACNG1Q06432 222 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TAF10Q12962 218 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPA0Q13151 305 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SGCGQ13326 291 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CDH18Q13634 790 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DHX34Q14147 1143 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SYT16Q17RD7 645 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 IZUMO4Q1ZYL8 232 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPA1L2Q32P51 320 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 AARDQ4LEZ3 155 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LACTB2Q53H82 288 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 BSPRYQ5W0U4 402 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PACS1Q6VY07 963 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 RFPL4BQ6ZWI9 263 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MARK2Q7KZI7 788 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PIGZQ86VD9 579 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GKN2Q86XP6 184 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC34Q8IZ02 419 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MCOLN2Q8IZK6 566 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TCAIMQ8N3R3 496 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF540Q8NDQ6 660 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 NUDCD2Q8WVJ2 157 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF48Q96MX3 618 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 BTBD9Q96Q07 612 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 VPS35Q96QK1 796 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 EBNA1BP2Q99848 306 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 NEURL2Q9BR09 285 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FUCA2Q9BTY2 467 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SPRY4Q9C004 299 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM7Q9C029 511 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 POLR1EQ9GZS1 481 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PCBD2Q9H0N5 130 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 STMN4Q9H169 189 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 POPDC3Q9HBV1 291 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM207AQ9NSI2 230 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SMOXQ9NWM0 555 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 NPAP1Q9NZP6 1156 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PAK5Q9P286 719 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TUBGCP4Q9UGJ1 667 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM153AQ9UHL3 310 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PLCL2Q9UPR0 1127 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 WBP11Q9Y2W2 641 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms