RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 A6NNC1 897 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 EDF1O60869 148 aaKnown RBP14.29□□□□□ -0.12
SKA2-209ENST00000583976 VIMP08670 466 aaKnown RBP14.29□□□□□ -0.12
SKA2-209ENST00000583976 HOXB4P17483 251 aaPredicted RBP14.29□□□□□ -0.12
SKA2-209ENST00000583976 KLK2P20151 261 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 MDH1P40925 334 aaKnown RBP14.29□□□□□ -0.12
SKA2-209ENST00000583976 AQP5P55064 265 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 LTB4RQ15722 352 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 SMU1Q2TAY7 513 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 KRTAP21-3Q3LHN1 58 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 ZNF385BQ569K4 471 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 DESI1Q6ICB0 168 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 FAM111BQ6SJ93 734 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 EPGNQ6UW88 154 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 SLC15A4Q8N697 577 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 KRTCAP2Q8N6L1 136 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 PPCDCQ96CD2 204 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 MAELQ96JY0 434 aaKnown RBP14.29□□□□□ -0.12
SKA2-209ENST00000583976 MARK4Q96L34 752 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 OR52B2Q96RD2 323 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 GSX1Q9H4S2 264 aaPredicted RBP14.29□□□□□ -0.12
SKA2-209ENST00000583976 SLC24A3Q9HC58 644 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.29□□□□□ -0.12
SKA2-209ENST00000583976 EHD3Q9NZN3 535 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 DOCK7Q96N67 2140 aa14.29□□□□□ -0.12
SKA2-209ENST00000583976 FAM221AA4D161 298 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 HSPB2A8KAH6 182 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 FAM47E-STBD1D6RA91 191 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 DVL2O14641 736 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 TRAPPC6AO75865 159 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 ALDOCP09972 364 aaKnown RBP14.28□□□□□ -0.12
SKA2-209ENST00000583976 SOX18P35713 384 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 HPCAL1P37235 193 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 IDH3AP50213 366 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 NCBP2P52298 156 aaKnown RBP eCLIP14.28□□□□□ -0.12
SKA2-209ENST00000583976 AGFG1P52594 562 aaKnown RBP14.28□□□□□ -0.12
SKA2-209ENST00000583976 GYS2P54840 703 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 NME5P56597 212 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 SF3A3Q12874 501 aaKnown RBP eCLIP14.28□□□□□ -0.12
SKA2-209ENST00000583976 HSPB2Q16082 182 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 LSM12Q3MHD2 195 aaKnown RBP14.28□□□□□ -0.12
SKA2-209ENST00000583976 EIPR1Q53HC9 387 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 C6orf163Q5TEZ5 329 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 PAMR1Q6UXH9 720 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 GALNT12Q8IXK2 581 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 DND1Q8IYX4 353 aaKnown RBP14.28□□□□□ -0.12
SKA2-209ENST00000583976 OR7A2PQ8NGA2 310 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 SPPL2AQ8TCT8 520 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 RNASE6Q93091 150 aaKnown RBP14.28□□□□□ -0.12
SKA2-209ENST00000583976 CIDECQ96AQ7 238 aaPredicted RBP14.28□□□□□ -0.12
SKA2-209ENST00000583976 TIMP4Q99727 224 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 EBF4Q9BQW3 602 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 UBQLN3Q9H347 655 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 CXorf21Q9HAI6 301 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 NPHS2Q9NP85 383 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 QPCTLQ9NXS2 382 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 ASIC5Q9NY37 505 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 CAMK2AQ9UQM7 478 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 C15orf41Q9Y2V0 281 aa14.28□□□□□ -0.12
SKA2-209ENST00000583976 C2orf92A0A1B0GVN3 265 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 OR6C76A6NM76 312 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 GNB5O14775 395 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 SCAMP2O15127 329 aaKnown RBP14.27□□□□□ -0.13
SKA2-209ENST00000583976 ATP1B1P05026 303 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 EFNA1P20827 205 aaPredicted RBP14.27□□□□□ -0.13
SKA2-209ENST00000583976 NTSP30990 170 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 CEACAM8P31997 349 aaPredicted RBP14.27□□□□□ -0.13
SKA2-209ENST00000583976 GALNSP34059 522 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 MPIP34949 423 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 MASP1P48740 699 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 CDK9P50750 372 aaKnown RBP14.27□□□□□ -0.13
SKA2-209ENST00000583976 PRICKLE4Q2TBC4 344 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 TRMT12Q53H54 448 aaKnown RBP14.27□□□□□ -0.13
SKA2-209ENST00000583976 TMEM198Q66K66 360 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 OGFOD2Q6N063 350 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 PLXDC2Q6UX71 529 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 R3HCC1LQ7Z5L2 792 aaKnown RBP14.27□□□□□ -0.13
SKA2-209ENST00000583976 SPATA19Q7Z5L4 167 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 LACC1Q8IV20 430 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 LRRC34Q8IZ02 419 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 SAMD14Q8IZD0 417 aaPredicted RBP14.27□□□□□ -0.13
SKA2-209ENST00000583976 TAGAPQ8N103 731 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 OR9A2Q8NGT5 310 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 CEP70Q8NHQ1 597 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 RFWD2Q8NHY2 731 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 ACTRT2Q8TDY3 377 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 KAT2AQ92830 837 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 GNRHR2Q96P88 292 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 DPY30Q9C005 99 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 PRDM14Q9GZV8 571 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 GLIPR2Q9H4G4 154 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 ANKRA2Q9H9E1 313 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 DLL4Q9NR61 685 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 FGFR1OP2Q9NVK5 253 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 TAS2R7Q9NYW3 318 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 MAT2BQ9NZL9 334 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 ATP6V1HQ9UI12 483 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 DCTN4Q9UJW0 460 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 PCDHGB3Q9Y5G1 929 aa14.27□□□□□ -0.13
SKA2-209ENST00000583976 MYO1GB0I1T2 1018 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms