RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 KCNK2O95069 426 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 FUT4P22083 530 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 MYF6P23409 242 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 PRKAR1BP31321 381 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 TRHRP34981 398 aaPredicted RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 RFX3P48380 749 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 FOXL2P58012 376 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 ADARB1P78563 741 aaKnown RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 DCDP81605 110 aaKnown RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 PSG6Q00889 435 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 OCA2Q04671 838 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 FOXD4Q12950 439 aaPredicted RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 ELAVL1Q15717 326 aaKnown RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 NPTX1Q15818 432 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 SLC36A3Q495N2 470 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 ZNF385CQ66K41 422 aaPredicted RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 FAAH2Q6GMR7 532 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 TCTN3Q6NUS6 607 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 ZNF836Q6ZNA1 936 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 RBM44Q6ZP01 1051 aaKnown RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 SHISA6Q6ZSJ9 500 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 ZAR1Q86SH2 424 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 CYP4Z1Q86W10 505 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 BPHLQ86WA6 291 aaPredicted RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 PEX5LQ8IYB4 626 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 ZNF321PQ8N8H1 164 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 BMPERQ8N8U9 685 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 PLPP5Q8NEB5 264 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 OR7G1Q8NGA0 311 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 OR4N2Q8NGD1 307 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 OR52J3Q8NH60 311 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 C16orf52Q8NHV5 167 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 STT3BQ8TCJ2 826 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 GIPC3Q8TF64 312 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 GATA6Q92908 595 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 RDH12Q96NR8 316 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 TGIF2Q9GZN2 237 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 ACER3Q9NUN7 267 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 KIF17Q9P2E2 1029 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 PRODH2Q9UF12 536 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 TMEFF2Q9UIK5 374 aaPredicted RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 KCND3Q9UK17 655 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 GPR55Q9Y2T6 319 aaPredicted RBP9.76□□□□□ -0.85
SS18-217ENST00000580958 CHST2Q9Y4C5 530 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 ORC6Q9Y5N6 252 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 OTOGLQ3ZCN5 2332 aa9.76□□□□□ -0.85
SS18-217ENST00000580958 IGLV3-12A0A075B6K2 115 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 MAGEA13PA6NCF6 341 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 TTC36A6NLP5 189 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 H0YAE9 185 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 PEX12O00623 359 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 FFAR1O14842 300 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 PCDH17O14917 1159 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 POLR1CO15160 346 aaPredicted RBP9.75□□□□□ -0.85
SS18-217ENST00000580958 DYRK3O43781 588 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 KIAA0513O60268 411 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 SEMA7AO75326 666 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 SOX30O94993 753 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 GADD45GO95257 159 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 CLIC3O95833 236 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 DDAH2O95865 285 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 ONECUT2O95948 504 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 DBIP07108 87 aaKnown RBP9.75□□□□□ -0.85
SS18-217ENST00000580958 HEXBP07686 556 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 LYNP07948 512 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 GNAO1P09471 354 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 ZGLP1P0C6A0 271 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 CCL4P13236 92 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 ZNF28P17035 718 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 RPS4Y1P22090 263 aaKnown RBP9.75□□□□□ -0.85
SS18-217ENST00000580958 IGFBP5P24593 272 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 RORAP35398 523 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 LIMS1P48059 325 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 RNF144AP50876 292 aaPredicted RBP9.75□□□□□ -0.85
SS18-217ENST00000580958 CHN2P52757 468 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 RAD23AP54725 363 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 MYBPC1Q00872 1141 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 IL1RL1Q01638 556 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 MC2RQ01718 297 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 IL11RAQ14626 422 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 LARS2Q15031 903 aaKnown RBP9.75□□□□□ -0.85
SS18-217ENST00000580958 NSDHLQ15738 373 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 NNATQ16517 81 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 MAPK14Q16539 360 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 RFX4Q33E94 735 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 KDM4DQ6B0I6 523 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 LCN10Q6JVE6 187 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 FAHD1Q6P587 224 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 ISLR2Q6UXK2 745 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 LANCL3Q6ZV70 420 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 GALNT5Q7Z7M9 940 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 TAGAPQ8N103 731 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 CLIP4Q8N3C7 705 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 ATG16L2Q8NAA4 619 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 OR10G2Q8NGC3 310 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 OR6T1Q8NGN1 323 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 OR14A16Q8NHC5 309 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 SLC2A12Q8TD20 617 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 ZNF721Q8TF20 911 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 PMEPA1Q969W9 287 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms