RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 FOXN4Q96NZ1 517 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 ALG8Q9BVK2 526 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 RETREG1Q9H6L5 497 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 ZNF670-ZNF695F2Z2N8 137 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 RNGTTO60942 597 aaKnown RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 KLF8O95600 359 aaPredicted RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 IGLV3-25P01717 112 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 AQP6Q13520 282 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SMAD2Q15796 467 aaKnown RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SWI5Q1ZZU3 235 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 ZCCHC12Q6PEW1 402 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 LRFN4Q6PJG9 635 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 USP53Q70EK8 1073 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 VWA5B2Q8N398 1253 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 OR5J2Q8NH18 312 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 HMGCLL1Q8TB92 370 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 ITPKCQ96DU7 683 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 BRF2Q9HAW0 419 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 MGAT4CQ9UBM8 478 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 PSORS1C1Q9UIG5 152 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 MGAT4AQ9UM21 535 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 TEX13CA0A0J9YWL9 993 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 CPED1A4D0V7 1026 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 MEIS3P1A6NDR6 274 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 EIF3FO00303 357 aaPredicted RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 UBXN7O94888 489 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 S100A9P06702 114 aaKnown RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SSTR2P30874 369 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 CCDC58Q4VC31 144 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SLC9B2Q86UD5 537 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 PDZD3Q86UT5 571 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SPERTQ8NA61 448 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SYT14Q8NB59 555 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 CREB3L4Q8TEY5 395 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SNAPC3Q92966 411 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 CCDC32Q9BV29 185 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 PRRG4Q9BZD6 226 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 ARL6Q9H0F7 186 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 C14orf105Q9NVL8 296 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 TRAV27A0A087WT01 109 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 CTSAP10619 480 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 GTF2F2P13984 249 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 UQCRC1P31930 480 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 MAGEA2P43356 314 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 PFN3P60673 137 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 IRF5Q13568 498 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 EXOSC7Q15024 291 aaKnown RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 EIF4HQ15056 248 aaKnown RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SF3B4Q15427 424 aaKnown RBP eCLIP11.36□□□□□ -0.591e-6■■■■■ 26.8
ERBB2-206ENST00000578373 PAQR6Q6TCH4 344 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 GID4Q8IVV7 300 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SDR9C7Q8NEX9 313 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 TRMT10AQ8TBZ6 339 aaKnown RBP11.36□□□□□ -0.59
ERBB2-206ENST00000578373 MBOAT4Q96T53 435 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 VNN3Q9NY84 501 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 GABARAPO95166 117 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 S100A6P06703 90 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 H2AFB2P0C5Z0 115 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 DRD2P14416 443 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 HMGA1P17096 107 aaKnown RBP11.35□□□□□ -0.59
ERBB2-206ENST00000578373 CEBPBP17676 345 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 TGM4P49221 684 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 SMCO1Q147U7 214 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 DECR1Q16698 335 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 TATDN3Q17R31 274 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 SLCO4C1Q6ZQN7 724 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 HTR3DQ70Z44 454 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 CCDC28AQ8IWP9 274 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 CDS1Q92903 461 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 DTD2Q96FN9 168 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 WASHC1A8K0Z3 465 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 K7ESM1 405 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 RNF13O43567 381 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 UGDHO60701 494 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 LATS1O95835 1130 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 RAB3BP20337 219 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 MLLT3P42568 568 aaPredicted RBP11.35□□□□□ -0.59
ERBB2-206ENST00000578373 C1orf94Q6P1W5 598 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 FTMTQ8N4E7 242 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 DNAJA4Q8WW22 397 aaPredicted RBP11.35□□□□□ -0.59
ERBB2-206ENST00000578373 HRASLS5Q96KN8 279 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 CCDC115Q96NT0 180 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 LMF1Q96S06 567 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 SLC17A9Q9BYT1 436 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 GSKIPQ9P0R6 139 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 SH2B3Q9UQQ2 575 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 RASD1Q9Y272 281 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 SOX9P48436 509 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 BLKP51451 505 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 SLC35A2P78381 396 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 UNC5DQ6UXZ4 953 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 GPAT4Q86UL3 456 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 ASB12Q8WXK4 309 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 BADQ92934 168 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 P2RY12Q9H244 342 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 HPF1Q9NWY4 346 aa11.35□□□□□ -0.59
ERBB2-206ENST00000578373 RBMXL2O75526 392 aaKnown RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 ARAFP10398 606 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms