RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 AKT2P31751 481 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 C17orf99Q6UX52 265 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 LIPIQ6XZB0 460 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 GLCCI1Q86VQ1 547 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 FCAMRQ8WWV6 532 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 TRIM2Q9C040 744 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 FABP7O15540 132 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 ALDOBP05062 364 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 DDCP20711 480 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 PFN3P60673 137 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 RAB12Q6IQ22 244 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 USP51Q70EK9 711 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 CCDC36Q8IYA8 594 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 SLC41A3Q96GZ6 507 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 OR2S2Q9NQN1 319 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 TEX10Q9NXF1 929 aaPredicted RBP16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 TAS2R3Q9NYW6 316 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 PCDHGB1Q9Y5G3 927 aa16.88■□□□□ 0.29
ATPAF1-214ENST00000576409 WASHC1A8K0Z3 465 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 RGS9O75916 674 aaPredicted RBP16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 SLC6A6P31641 620 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 CLDN12P56749 244 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 CHRNEQ04844 493 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 FAAH2Q6GMR7 532 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 LRRN1Q6UXK5 716 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 ATCAYQ86WG3 371 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 SETD6Q8TBK2 473 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 SLA2Q9H6Q3 261 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 BRF2Q9HAW0 419 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 RC3H2Q9HBD1 1191 aaKnown RBP16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 SSX4O60224 188 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 MRPS14O60783 128 aaKnown RBP16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 HTR1AP08908 422 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 PITPNBP48739 271 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 SWI5Q1ZZU3 235 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 RIT1Q92963 219 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 CREB3L1Q96BA8 519 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 OR51J1Q9H342 316 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 CKAP5Q14008 2032 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 PRKYO43930 277 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 PIP5K1CO60331 668 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 RBBP9O75884 186 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 TACSTD2P09758 323 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 PGAM2P15259 253 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 SNTA1Q13424 505 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 GID4Q8IVV7 300 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 SLC7A13Q8TCU3 470 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 C7orf34Q96L11 122 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 MKRN2Q9H000 416 aaKnown RBP16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 TMEM185BQ9H7F4 350 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 IFT46Q9NQC8 304 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 ATXN7L1Q9ULK2 861 aaPredicted RBP16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 SH2B3Q9UQQ2 575 aa16.87■□□□□ 0.29
ATPAF1-214ENST00000576409 KANTRA0A1W2PQU2 76 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ZNF823P16415 610 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 SHC1P29353 583 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 CLDN2P57739 230 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 TAP2Q03519 686 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 MLLT11Q13015 90 aaPredicted RBP16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ARFRP1Q13795 201 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 DHRS4L2Q6PKH6 230 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 MSRB3Q8IXL7 192 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 SDR16C5Q8N3Y7 309 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 C14orf105Q9NVL8 296 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 EDDM13A0A1B0GTR0 161 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 C1orf105O95561 183 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ETHE1O95571 254 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 PTH2RP49190 550 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 DSC1Q08554 894 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 L3MBTL4Q8NA19 623 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 OR6T1Q8NGN1 323 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 CD93Q9NPY3 652 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 LIPCP11150 499 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 CHRNB1P11230 501 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 TIMP2P16035 220 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 DHCR24Q15392 516 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 FCN2Q15485 313 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ACSM3Q53FZ2 586 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ALG1LQ6GMV1 187 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ZNF767PQ75MW2 155 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 BHLHA9Q7RTU4 235 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 TMEFF1Q8IYR6 380 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ZNF101Q8IZC7 436 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ADAMTS19Q8TE59 1207 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 SLC7A6Q92536 515 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 CTRCQ99895 268 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 FBXO8Q9NRD0 319 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 CCL26Q9Y258 94 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 ARFGEF1Q9Y6D6 1849 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 USP54Q70EL1 1684 aa16.86■□□□□ 0.29
ATPAF1-214ENST00000576409 TRAV27A0A087WT01 109 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 A0A0G2JPF8 293 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 HNRNPCL3B7ZW38 293 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 UGDHO60701 494 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 COQ9O75208 318 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 ARHGEF15O94989 841 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SPDEFO95238 335 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 HNRNPCL4P0DMR1 293 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 GDI1P31150 447 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SQSTM1Q13501 440 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms