RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 WDR55Q9H6Y2 383 aaPredicted RBP21.46■■□□□ 1.03
SNF8-217ENST00000576353 EML6Q6ZMW3 1958 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 SPTBN1Q01082 2364 aaKnown RBP21.46■■□□□ 1.03
SNF8-217ENST00000576353 CLDN1O95832 211 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 ALOX5P09917 674 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 EPHA3P29320 983 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 TRPC1P48995 793 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 CLK3P49761 638 aaKnown RBP21.45■■□□□ 1.02
SNF8-217ENST00000576353 CLNS1AP54105 237 aaKnown RBP21.45■■□□□ 1.02
SNF8-217ENST00000576353 EMC4Q5J8M3 183 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 WLSQ5T9L3 541 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 TMEM211Q6ICI0 200 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 XKRXQ6PP77 449 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 VPS37AQ8NEZ2 397 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 OR8J2Q8NGG1 315 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 LRRC8CQ8TDW0 803 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 RNF138Q8WVD3 245 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 TESCQ96BS2 214 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 DMRTA2Q96SC8 542 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 PNPLA3Q9NST1 481 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 PCDHGB4Q9UN71 923 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 ABCG2Q9UNQ0 655 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 HRH3Q9Y5N1 445 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 WIF1Q9Y5W5 379 aa21.45■■□□□ 1.02
SNF8-217ENST00000576353 DIDO1Q9BTC0 2240 aaKnown RBP21.45■■□□□ 1.02
SNF8-217ENST00000576353 GXYLT2A0PJZ3 443 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 FIGNL2A6NMB9 653 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 RNASET2O00584 256 aaKnown RBP21.44■■□□□ 1.02
SNF8-217ENST00000576353 ANKRD28O15084 1053 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 SOX30O94993 753 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 HMGN2P05204 90 aaKnown RBP21.44■■□□□ 1.02
SNF8-217ENST00000576353 AGAP20933 346 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 EVI2BP34910 448 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 KIR3DL1P43629 444 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 RFX3P48380 749 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 ADORA2A-AS1P86434 159 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 DPY19L1Q2PZI1 675 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 ANXA8L1Q5VT79 327 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 OR4F3Q6IEY1 312 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 BHLHB9Q6PI77 547 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 PLCZ1Q86YW0 608 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 WDSUB1Q8N9V3 476 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 SLC16A11Q8NCK7 471 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 OR5M9Q8NGP3 310 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 SFXN5Q8TD22 340 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 DYDC1Q8WWB3 177 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 PIK3R3Q92569 461 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 RMND5BQ96G75 393 aaPredicted RBP21.44■■□□□ 1.02
SNF8-217ENST00000576353 CXorf36Q9H7Y0 433 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 SDHAF3Q9NRP4 125 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 FAM120CQ9NX05 1096 aaKnown RBP21.44■■□□□ 1.02
SNF8-217ENST00000576353 SPRR3Q9UBC9 169 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 MYO7BQ6PIF6 2116 aa21.44■■□□□ 1.02
SNF8-217ENST00000576353 NINQ8N4C6 2090 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 GOLGA8QA0A0J9YX86 632 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 GOLGA8OA6NCC3 632 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 GOLGA8NF8WBI6 632 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 FADS1O60427 444 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 KRT16P08779 473 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 ACP2P11117 423 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 ENDOUP21128 410 aaKnown RBP21.43■■□□□ 1.02
SNF8-217ENST00000576353 HBA1P69905 142 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 DUSP5Q16690 384 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 NXNQ6DKJ4 435 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 ZNF585AQ6P3V2 769 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 COX18Q8N8Q8 333 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 JADE3Q92613 823 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 C16orf58Q96GQ5 468 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 C7orf26Q96N11 449 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 SERHLQ9NQF3 203 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 AIG1Q9NVV5 245 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 GIN1Q9NXP7 522 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 TNFRSF10DQ9UBN6 386 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 FAF1Q9UNN5 650 aaPredicted RBP21.43■■□□□ 1.02
SNF8-217ENST00000576353 PCDHGB3Q9Y5G1 929 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 SETXQ7Z333 2677 aaKnown RBP21.43■■□□□ 1.02
SNF8-217ENST00000576353 GTF3C1Q12789 2109 aa21.43■■□□□ 1.02
SNF8-217ENST00000576353 C15orf38-AP3S2A0A0A6YYH1 394 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 PRSS51A0A1B0GVH4 220 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 WDR1O75083 606 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 HOXD4P09016 255 aaPredicted RBP21.42■■□□□ 1.02
SNF8-217ENST00000576353 ALDOCP09972 364 aaKnown RBP21.42■■□□□ 1.02
SNF8-217ENST00000576353 ACVR2AP27037 513 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 GCKP35557 465 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 GAS1P54826 345 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 PPP2R2AP63151 447 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 ART3Q13508 389 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 TP53BP2Q13625 1128 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 LASP1Q14847 261 aaKnown RBP21.42■■□□□ 1.02
SNF8-217ENST00000576353 EXOSC6Q5RKV6 272 aaKnown RBP21.42■■□□□ 1.02
SNF8-217ENST00000576353 FBXO30Q8TB52 745 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 ACTRT2Q8TDY3 377 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 CHMP6Q96FZ7 201 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 MAELQ96JY0 434 aaKnown RBP21.42■■□□□ 1.02
SNF8-217ENST00000576353 STACQ99469 402 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 YIPF4Q9BSR8 244 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 ACTRT3Q9BYD9 372 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 ACBD3Q9H3P7 528 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 DUSP22Q9NRW4 184 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 INTS9Q9NV88 658 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms