RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ZNF696Q9H7X3 374 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 PTGES2Q9H7Z7 377 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 FOLH1BQ9HBA9 442 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 ZBTB26Q9HCK0 441 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CTNNAL1Q9UBT7 734 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 PRODH2Q9UF12 536 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 BCAP29Q9UHQ4 241 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 METRNQ9UJH8 293 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 ZNF490Q9ULM2 529 aaPredicted RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 PRKDCP78527 4128 aaKnown RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.24□□□□□ -1.577e-7■□□□□ 8.9
SMG6-219ENST00000575663 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 TMEM89A2RUT3 159 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 GOLGA6L10A6NI86 522 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 SHISA9B4DS77 424 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 GOLGA8MH3BSY2 632 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TRIM77I1YAP6 450 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 PLPP1O14494 284 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 EIF1AYO14602 144 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 RAMP1O60894 148 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 REM1O75628 298 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 STK16O75716 305 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 VENTXO95231 258 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TTC4O95801 387 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 AHSGP02765 367 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 S100BP04271 92 aaPredicted RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 CT62P0C5K7 136 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 FAM58BPP0C7Q3 252 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 PTNP21246 168 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 AGTR1P30556 359 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TTKP33981 857 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 CASP2P42575 452 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 NR4A2P43354 598 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 MAGEA6P43360 314 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 HSPA7P48741 367 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 VPS41P49754 854 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 CLDN20P56880 219 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 B3GALT5-AS1P59052 145 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 CHRNB3Q05901 458 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 CHIT1Q13231 466 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 DDX39BQ13838 428 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 ACAP2Q15057 778 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 PPA1Q15181 289 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TGFBIQ15582 683 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TSNQ15631 228 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 TBCCQ15814 346 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 STK11Q15831 433 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 C18orf21Q32NC0 220 aaPredicted RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 TMEM201Q5SNT2 666 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 SFRP5Q5T4F7 317 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TMEM108Q6UXF1 575 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 ATG4DQ86TL0 474 aaPredicted RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 NUDT13Q86X67 352 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 LAS2Q8IYD9 372 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 PLD6Q8N2A8 252 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 GOLGA6L1Q8N7Z2 621 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 ZNF540Q8NDQ6 660 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 SPATA4Q8NEY3 305 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 OR4K14Q8NGD5 310 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 OR52B6Q8NGF0 335 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 PIWIL2Q8TC59 973 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 ZNF418Q8TF45 676 aaPredicted RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 TMBIM1Q969X1 311 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 MUCL1Q96DR8 90 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 SLC35A4Q96G79 324 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 ADOQ96SZ5 270 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 DHRS9Q9BPW9 319 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TMEM79Q9BSE2 394 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 LRRC1Q9BTT6 524 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TRMOQ9BU70 441 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 RBM4Q9BWF3 364 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 PRR14Q9BWN1 585 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 SORBS1Q9BX66 1292 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 DDX47Q9H0S4 455 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 OR51B5Q9H339 312 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 MYOZ1Q9NP98 299 aaPredicted RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 PPANQ9NQ55 473 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 SMYD2Q9NRG4 433 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 SDHAF3Q9NRP4 125 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 ARGLU1Q9NWB6 273 aaPredicted RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 FBXO34Q9NWN3 711 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TMEFF2Q9UIK5 374 aaPredicted RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 IKZF3Q9UKT9 509 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 MGAT4BQ9UQ53 548 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 TMA7Q9Y2S6 64 aaKnown RBP5.24□□□□□ -1.57
SMG6-219ENST00000575663 VWA7Q9Y334 891 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 PLLPQ9Y342 182 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 ZNF337Q9Y3M9 751 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 AP4B1Q9Y6B7 739 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 PMF1-BGLAPU3KQ54 211 aa5.24□□□□□ -1.57
SMG6-219ENST00000575663 A0A0A6YYD5 115 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 A0A1W2PR48 441 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 OR2M5A3KFT3 312 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 DPRXA6NFQ7 191 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 TO15178 435 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 TMPRSS2O15393 492 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 ATP8B1O43520 1251 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 SCO2O43819 266 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 CCNT2O60583 730 aaKnown RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 GCM2O75603 506 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms