RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 COL21A1Q96P44 957 aa12.14□□□□□ -0.47
RPAIN-216ENST00000575599 MS4A4EQ96PG1 132 aa12.14□□□□□ -0.47
RPAIN-216ENST00000575599 PSMG3-AS1Q96PY0 264 aa12.14□□□□□ -0.47
RPAIN-216ENST00000575599 PRPF18Q99633 342 aaKnown RBP12.14□□□□□ -0.47
RPAIN-216ENST00000575599 GALNT9Q9HCQ5 603 aa12.14□□□□□ -0.47
RPAIN-216ENST00000575599 Q9N2J8 555 aa12.14□□□□□ -0.47
RPAIN-216ENST00000575599 ATAD3AQ9NVI7 634 aa12.14□□□□□ -0.47
RPAIN-216ENST00000575599 ASIC5Q9NY37 505 aa12.14□□□□□ -0.47
RPAIN-216ENST00000575599 SNX8Q9Y5X2 465 aa12.14□□□□□ -0.47
RPAIN-216ENST00000575599 USP9XQ93008 2570 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-216ENST00000575599 NCKAP5O14513 1909 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 A0A1W2PRB8 838 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 WIPF3A6NGB9 483 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 NPIPA3F8WFD2 350 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 TSPAN2O60636 221 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 IFI6P09912 130 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 CLDN8P56748 225 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 PSPHP78330 225 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 SQLEQ14534 574 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 SLC10A1Q14973 349 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 TOMM20Q15388 145 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 PGS1Q32NB8 556 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 OGFOD2Q6N063 350 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 ANGPTL8Q6UXH0 198 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 DOLPP1Q86YN1 238 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 MIER2Q8N344 545 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 SLC35A4Q96G79 324 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 CCDC120Q96HB5 630 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 LMF2Q9BU23 707 aaKnown RBP12.13□□□□□ -0.47
RPAIN-216ENST00000575599 DUSP26Q9BV47 211 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 NMUR2Q9GZQ4 415 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 SLC6A15Q9H2J7 730 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 C3orf14Q9HBI5 128 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 TNFRSF10DQ9UBN6 386 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 CBLCQ9ULV8 474 aa12.13□□□□□ -0.47
RPAIN-216ENST00000575599 LRRK2Q5S007 2527 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 DIDO1Q9BTC0 2240 aaKnown RBP12.12□□□□□ -0.47
RPAIN-216ENST00000575599 ZNF407Q9C0G0 2248 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 TRGV5A0A0B4J1U4 118 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 CFLARO15519 480 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 EMC8O43402 210 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 ICOSLGO75144 302 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 TRAPPC6AO75865 159 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 C6orf47O95873 294 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 IGHG3P01860 377 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 GABRA3P34903 492 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 PTGDSP41222 190 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 TRPC1P48995 793 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 MAN2A2P49641 1150 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 ATP4BP51164 291 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 PRR5P85299 388 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 GAB1Q13480 694 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 EFR3AQ14156 821 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 DECR1Q16698 335 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 FNDC7Q5VTL7 733 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 SLC30A6Q6NXT4 461 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 NCCRP1Q6ZVX7 275 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-216ENST00000575599 TRILQ7L0X0 811 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 RIMKLAQ8IXN7 391 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 GPR151Q8TDV0 419 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 PIK3R3Q92569 461 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 SLC9A6Q92581 669 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 JADE3Q92613 823 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 FAM120BQ96EK7 910 aaKnown RBP12.12□□□□□ -0.47
RPAIN-216ENST00000575599 OTUB1Q96FW1 271 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-216ENST00000575599 TMEM41AQ96HV5 264 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 GNRHR2Q96P88 292 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 ZBTB18Q99592 522 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 DPY30Q9C005 99 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 BHLHE41Q9C0J9 482 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-216ENST00000575599 SAR1AQ9NR31 198 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 SIRT3Q9NTG7 399 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-216ENST00000575599 ZCCHC3Q9NUD5 404 aaKnown RBP12.12□□□□□ -0.47
RPAIN-216ENST00000575599 MAPRE3Q9UPY8 281 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 C15orf41Q9Y2V0 281 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 CAPN7Q9Y6W3 813 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 GTF3C1Q12789 2109 aa12.12□□□□□ -0.47
RPAIN-216ENST00000575599 MYO7BQ6PIF6 2116 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 GXYLT2A0PJZ3 443 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 CCT8L1PA6NM43 557 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 CYP4B1P13584 511 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 ELAVL4P26378 380 aaKnown RBP12.11□□□□□ -0.47
RPAIN-216ENST00000575599 ADSLP30566 484 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-216ENST00000575599 SOAT1P35610 550 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 PNLIPRP2P54317 469 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 NME5P56597 212 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 C21orf58P58505 322 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 MRPS22P82650 360 aaKnown RBP12.11□□□□□ -0.47
RPAIN-216ENST00000575599 MLC1Q15049 377 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 MAPRE2Q15555 327 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 SPDYE7PQ495Y7 208 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 VPS26BQ4G0F5 336 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 CYP27C1Q4G0S4 372 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 TIGD3Q6B0B8 471 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 OR4F3Q6IEY1 312 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms