RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 VSTM2LQ96N03 204 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 GRIP2Q9C0E4 1043 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 ALG2Q9H553 416 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 ELOVL6Q9H5J4 265 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 MCTS1Q9ULC4 181 aaKnown RBP8.07□□□□□ -1.12
SMG6-218ENST00000575454 SNX12Q9UMY4 172 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 ABCG2Q9UNQ0 655 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 LIPT1Q9Y234 373 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 OR10H1Q9Y4A9 318 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 MPDZO75970 2070 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 A0A1W2PP18 115 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 TCRBV9S1A1TA0A576 114 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 FAM159BA6NKW6 160 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 H0YC42 278 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 H3BML4 177 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 EIF3HO15372 352 aaKnown RBP eCLIP8.06□□□□□ -1.12
SMG6-218ENST00000575454 CLOCKO15516 846 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 PIAS1O75925 651 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 AQP8O94778 261 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 SYNGR4O95473 234 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 SOD3P08294 240 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 GSTA2P09210 222 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 PABPC4LP0CB38 370 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 TCP1P17987 556 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 ACVR1BP36896 505 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 EIF1AXP47813 144 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 CCNG1P51959 295 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 PSMD4P55036 377 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 TPD52P55327 224 aaPredicted RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 CLDN20P56880 219 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 DLG1Q12959 904 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 ACAP2Q15057 778 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 NRF1Q16656 503 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 ZNF672Q499Z4 452 aaPredicted RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 ZNF628Q5EBL2 1059 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 C6orf52Q5T4I8 152 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 PPP4R4Q6NUP7 873 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 DNM1P46Q6ZS02 220 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 C3orf62Q6ZUJ4 267 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 SSX8Q7RTT4 187 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 COMMD6Q7Z4G1 85 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 WDR75Q8IWA0 830 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 SLC44A2Q8IWA5 706 aaPredicted RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 LRRC8AQ8IWT6 810 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 CTAGE3PQ8IX95 158 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 OR2M3Q8NG83 312 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 OR52B6Q8NGF0 335 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 UHMK1Q8TAS1 419 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 TM4SF18Q96CE8 201 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 C1GALT1C1Q96EU7 318 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 ZNF681Q96N22 645 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 KCNK17Q96T54 332 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 NTMT1Q9BV86 223 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 MRPL1Q9BYD6 325 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 SHCBP1LQ9BZQ2 653 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 NOL11Q9H8H0 719 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 ZBTB26Q9HCK0 441 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 PFDN4Q9NQP4 134 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 GIMAP4Q9NUV9 329 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 TAS2R9Q9NYW1 312 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 MRTO4Q9UKD2 239 aaKnown RBP8.06□□□□□ -1.12
SMG6-218ENST00000575454 UTS2RQ9UKP6 389 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 NFU1Q9UMS0 254 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 PKD1L1Q8TDX9 2849 aa8.06□□□□□ -1.12
SMG6-218ENST00000575454 A0A087WZY1 265 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 EIF1AYO14602 144 aaKnown RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 SCO2O43819 266 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 PLOD3O60568 738 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 ADAM11O75078 769 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 ESRRBO95718 433 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 IGHV4-39P01824 125 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 THBS1P07996 1170 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 ADH6P28332 368 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 SSTR1P30872 391 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 CDKN1AP38936 164 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 ALDH9A1P49189 494 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 CORO7P57737 925 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 MRPS35P82673 323 aaKnown RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 NAB1Q13506 487 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 LTB4RQ15722 352 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 DECR1Q16698 335 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMG6-218ENST00000575454 CTU2Q2VPK5 515 aaKnown RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 CYP27C1Q4G0S4 372 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 NCMAPQ5T1S8 102 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 ALKBH2Q6NS38 261 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 CMC1Q7Z7K0 106 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 KLHL7Q8IXQ5 586 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 CCDC116Q8IYX3 515 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 LILRB1Q8NHL6 650 aaPredicted RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 ROBO4Q8WZ75 1007 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 S100PBPQ96BU1 408 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 EFHD2Q96C19 240 aaPredicted RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 NXNL1Q96CM4 212 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 CNRIP1Q96F85 164 aaPredicted RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 ADAD1Q96M93 576 aaKnown RBP8.05□□□□□ -1.12
SMG6-218ENST00000575454 TRIM31Q9BZY9 425 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 SHARPINQ9H0F6 387 aa8.05□□□□□ -1.12
SMG6-218ENST00000575454 BRF2Q9HAW0 419 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms