RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 OR12D1P0DN82 309 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 CNR1P21554 472 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 KHKP50053 298 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 KCNJ2P63252 427 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 RPP38P78345 283 aaKnown RBP14.92□□□□□ -0.02
PFN1-203ENST00000574872 TLE1Q04724 770 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 EFR3AQ14156 821 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 INAQ16352 499 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 COX20Q5RI15 118 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 ZAR1Q86SH2 424 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 RETREG3Q86VR2 466 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 SNX32Q86XE0 403 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 OR2M7Q8NG81 312 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 ZFP90Q8TF47 636 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 TMCO6Q96DC7 493 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 JSRP1Q96MG2 331 aaPredicted RBP14.92□□□□□ -0.02
PFN1-203ENST00000574872 FRMD6Q96NE9 622 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 CCT8L2Q96SF2 557 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 FAM173AQ9BQD7 235 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 DOHHQ9BU89 302 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 TSPAN10Q9H1Z9 355 aaPredicted RBP14.92□□□□□ -0.02
PFN1-203ENST00000574872 IL1RL2Q9HB29 575 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 PROK2Q9HC23 129 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 GALNT9Q9HCQ5 603 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 RYDENQ9NUL5 291 aaKnown RBP14.92□□□□□ -0.02
PFN1-203ENST00000574872 TUBA8Q9NY65 449 aaPredicted RBP14.92□□□□□ -0.02
PFN1-203ENST00000574872 KLRF1Q9NZS2 232 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 CNIH4Q9P003 139 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 LEF1Q9UJU2 399 aaPredicted RBP14.92□□□□□ -0.02
PFN1-203ENST00000574872 EML6Q6ZMW3 1958 aa14.92□□□□□ -0.02
PFN1-203ENST00000574872 NBASA2RRP1 2371 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 LOC100653049A0A140TA62 436 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 C2orf72A6NCS6 295 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 PRAMEF25A6NGN4 478 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 HS6ST1O60243 411 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 KRT34O76011 436 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 KRT75O95678 551 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 ZCCHC18P0CG32 403 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 CASP3P42574 277 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 PNLIPRP2P54317 469 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 PSMD4P55036 377 aaKnown RBP14.91□□□□□ -0.02
PFN1-203ENST00000574872 PLGLB1Q02325 96 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 RNFT1Q5M7Z0 435 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 DCST2Q5T1A1 773 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.91□□□□□ -0.02
PFN1-203ENST00000574872 OLIG3Q7RTU3 272 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 MSRB3Q8IXL7 192 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 MIPOL1Q8TD10 442 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 XAGE5Q8WWM1 108 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 PHF12Q96QT6 1004 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 SECISBP2Q96T21 854 aaKnown RBP14.91□□□□□ -0.02
PFN1-203ENST00000574872 OSBPL11Q9BXB4 747 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 TPT1P8Q9HAU6 139 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 MRGBPQ9NV56 204 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 GIN1Q9NXP7 522 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 SLC25A37Q9NYZ2 338 aa14.91□□□□□ -0.02
PFN1-203ENST00000574872 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.91□□□□□ -0.02
PFN1-203ENST00000574872 DUXAA6NLW8 204 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 FAM166BA8MTA8 275 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 FBP2O00757 339 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 SCO2O43819 266 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 SHOX2O60902 331 aaPredicted RBP14.9□□□□□ -0.02
PFN1-203ENST00000574872 UTS2O95399 124 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 ZNF24P17028 368 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 HOXB9P17482 250 aaPredicted RBP14.9□□□□□ -0.02
PFN1-203ENST00000574872 MASP1P48740 699 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 GRAMD1BQ3KR37 738 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 LRIF1Q5T3J3 769 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 C16orf62Q7Z3J2 963 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 PIGWQ7Z7B1 504 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 DHDDSQ86SQ9 333 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 POU5F2Q8N7G0 328 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 FAM110BQ8TC76 370 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 OLAHQ9NV23 265 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 VAPAQ9P0L0 249 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 ARL2BPQ9Y2Y0 163 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 PCDHGB3Q9Y5G1 929 aa14.9□□□□□ -0.02
PFN1-203ENST00000574872 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.9□□□□□ -0.02
PFN1-203ENST00000574872 NINQ8N4C6 2090 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 SVILO95425 2214 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 NPIPA5A0A0B4J1W7 369 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 C17orf51A8MQB3 221 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 NPIPA7E9PJI5 369 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 PYCARD-AS1I3L0S3 204 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 HMGN4O00479 90 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 GNB5O14775 395 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 TFECO14948 347 aaPredicted RBP14.89□□□□□ -0.03
PFN1-203ENST00000574872 UNC5CO95185 931 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 CRYABP02511 175 aaKnown RBP14.89□□□□□ -0.03
PFN1-203ENST00000574872 NPIPA8P0DM63 369 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 ETFAP13804 333 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 ATP6V1C1P21283 382 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 MST1P26927 711 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 EVI2BP34910 448 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 PTGDSP41222 190 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 CRATP43155 626 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 RNF144AP50876 292 aaPredicted RBP14.89□□□□□ -0.03
PFN1-203ENST00000574872 ALDH6A1Q02252 535 aaKnown RBP14.89□□□□□ -0.03
PFN1-203ENST00000574872 FOXO1Q12778 655 aa14.89□□□□□ -0.03
PFN1-203ENST00000574872 STX5Q13190 355 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms