RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 RCN3Q96D15 328 aa20.27■□□□□ 0.84
RAB40B-207ENST00000572603 NODALQ96S42 347 aa20.27■□□□□ 0.84
RAB40B-207ENST00000572603 ADOQ96SZ5 270 aa20.27■□□□□ 0.84
RAB40B-207ENST00000572603 PROK2Q9HC23 129 aa20.27■□□□□ 0.84
RAB40B-207ENST00000572603 KLHL1Q9NR64 748 aa20.27■□□□□ 0.84
RAB40B-207ENST00000572603 DEPPQ9NTK1 212 aa20.27■□□□□ 0.84
RAB40B-207ENST00000572603 FBXO34Q9NWN3 711 aa20.27■□□□□ 0.84
RAB40B-207ENST00000572603 RALYQ9UKM9 306 aaKnown RBP20.27■□□□□ 0.84
RAB40B-207ENST00000572603 PRAMEF27A3QJZ7 478 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 CLIC1O00299 241 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 HMGN4O00479 90 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 ADAM10O14672 748 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 OR12D1P0DN82 309 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 CYP4B1P13584 511 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 CD46P15529 392 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 PRDX6P30041 224 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 PNLIPRP2P54317 469 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 NFATC3Q12968 1075 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.26■□□□□ 0.83
RAB40B-207ENST00000572603 DCST2Q5T1A1 773 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 HEPHL1Q6MZM0 1159 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 ANGPTL8Q6UXH0 198 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 NUP54Q7Z3B4 507 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 GALNTL5Q7Z4T8 443 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 GALNT10Q86SR1 603 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 FBXW8Q8N3Y1 598 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 TEX19Q8NA77 164 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 CHDHQ8NE62 594 aaPredicted RBP20.26■□□□□ 0.83
RAB40B-207ENST00000572603 RAB8BQ92930 207 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 C5orf34Q96MH7 638 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 LRRC37BQ96QE4 947 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 SECISBP2Q96T21 854 aaKnown RBP20.26■□□□□ 0.83
RAB40B-207ENST00000572603 CGREF1Q99674 301 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 TIMMDC1Q9NPL8 285 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 FLRT3Q9NZU0 649 aa20.26■□□□□ 0.83
RAB40B-207ENST00000572603 PRRC2CQ9Y520 2896 aaKnown RBP20.25■□□□□ 0.83
RAB40B-207ENST00000572603 ABCB7O75027 752 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 ZIC2O95409 532 aaPredicted RBP20.25■□□□□ 0.83
RAB40B-207ENST00000572603 ETFAP13804 333 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 IL12BP29460 328 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 PTGDSP41222 190 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 MAGEA8P43361 318 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 TXNL4AP83876 142 aaKnown RBP20.25■□□□□ 0.83
RAB40B-207ENST00000572603 STX5Q13190 355 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 SELPLGQ14242 412 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 RUNDC3AQ59EK9 446 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 BICRALQ6AI39 1079 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 RPUSD3Q6P087 351 aaKnown RBP20.25■□□□□ 0.83
RAB40B-207ENST00000572603 TMEM81Q6P7N7 255 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 FIGNL1Q6PIW4 674 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 TMEM178AQ8NBL3 297 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 TMEM125Q96AQ2 219 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 ANKRD27Q96NW4 1050 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 TRIM8Q9BZR9 551 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 IL1RL2Q9HB29 575 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.25■□□□□ 0.83
RAB40B-207ENST00000572603 KLF13Q9Y2Y9 288 aaPredicted RBP20.25■□□□□ 0.83
RAB40B-207ENST00000572603 NCKAP5O14513 1909 aa20.25■□□□□ 0.83
RAB40B-207ENST00000572603 DUXAA6NLW8 204 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 G3V3Y1 287 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 TP53I11O14683 189 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 ICOSLGO75144 302 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 C1QL1O75973 258 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 SOX30O94993 753 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 BMP2P12643 396 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 KRT20P35900 424 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 EFR3AQ14156 821 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 CAPRIN1Q14444 709 aaKnown RBP20.24■□□□□ 0.83
RAB40B-207ENST00000572603 RGNQ15493 299 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 MAPK11Q15759 364 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 PRAMEF20Q5VT98 475 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 OLIG3Q7RTU3 272 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 MTERF4Q7Z6M4 381 aaKnown RBP20.24■□□□□ 0.83
RAB40B-207ENST00000572603 FITM2Q8N6M3 262 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 SLC39A3Q9BRY0 314 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 SACM1LQ9NTJ5 587 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 CNIH4Q9P003 139 aa20.24■□□□□ 0.83
RAB40B-207ENST00000572603 PINLYPA6NC86 204 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 AGR2O95994 175 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 AK1P00568 194 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 PRB1P04280 392 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 PPIBP23284 216 aaKnown RBP20.23■□□□□ 0.83
RAB40B-207ENST00000572603 CASP3P42574 277 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 RFX3P48380 749 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 GPR85P60893 370 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 INAQ16352 499 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 ARHGAP11BQ3KRB8 267 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 MMEL1Q495T6 779 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 SLC22A10Q63ZE4 541 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 SULF2Q8IWU5 870 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 GRHL3Q8TE85 626 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 LRRC58Q96CX6 371 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 TAAR6Q96RI8 345 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 SDF2Q99470 211 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 ZNF350Q9GZX5 532 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 ARL8BQ9NVJ2 186 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 MRTO4Q9UKD2 239 aaKnown RBP20.23■□□□□ 0.83
RAB40B-207ENST00000572603 PCDHGB3Q9Y5G1 929 aa20.23■□□□□ 0.83
RAB40B-207ENST00000572603 SHANK1Q9Y566 2161 aa20.22■□□□□ 0.83
RAB40B-207ENST00000572603 ANKRD33BA6NCL7 494 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms