RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 PRKAG1P54619 331 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 GFRA1P56159 465 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 FOXF2Q12947 444 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 ARL13AQ5H913 290 aaPredicted RBP12.48□□□□□ -0.41
RAB40B-204ENST00000571554 GCNT2Q8N0V5 402 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 OR2L13Q8N349 312 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 OR5M1Q8NGP8 315 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 TCP10LQ8TDR4 215 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 TWIST2Q8WVJ9 160 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 PIK3R3Q92569 461 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 PPCDCQ96CD2 204 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 OTUB1Q96FW1 271 aaPredicted RBP12.48□□□□□ -0.41
RAB40B-204ENST00000571554 DSN1Q9H410 356 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 TAS2R7Q9NYW3 318 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 CRIM1Q9NZV1 1036 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 MED11Q9P086 117 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 SH3BP4Q9P0V3 963 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 CBLCQ9ULV8 474 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 PCNX3Q9H6A9 2034 aa12.48□□□□□ -0.41
RAB40B-204ENST00000571554 MBD3L4A6NDZ8 208 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 MBD3L3A6NE82 208 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 MBD3L5A6NJ08 208 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 CLCA1A8K7I4 914 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 PIP5K1BO14986 540 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 LSM1O15116 133 aaKnown RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 ZIC3O60481 467 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 PSMG1O95456 288 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 CHEK2O96017 543 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 NUDT17P0C025 328 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 TMIGD3P0DMS9 266 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 CAPN3P20807 821 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 ARRB2P32121 409 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 GABRA3P34903 492 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 KIR2DL3P43628 341 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 LHX2P50458 406 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 ZNHIT3Q15649 155 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 DECR1Q16698 335 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 ENPP6Q6UWR7 440 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 MARCH3Q86UD3 253 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 EXOC3L1Q86VI1 746 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 UBQLNLQ8IYU4 475 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 MBD3L2Q8NHZ7 208 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 ZPLD1Q8TCW7 415 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 AENQ8WTP8 325 aaKnown RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 NUDT8Q8WV74 236 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 RNF138Q8WVD3 245 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 INTS12Q96CB8 462 aaKnown RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 RMND5BQ96G75 393 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 FCRL1Q96LA6 429 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 CCT7Q99832 543 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 GPATCH1Q9BRR8 931 aaKnown RBP12.47□□□□□ -0.41
RAB40B-204ENST00000571554 G6PC3Q9BUM1 346 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 REEP4Q9H6H4 257 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 CALHM2Q9HA72 323 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 Q9N2J8 555 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 MKS1Q9NXB0 559 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 LGALS13Q9UHV8 139 aa12.47□□□□□ -0.41
RAB40B-204ENST00000571554 MED12LQ86YW9 2145 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 SPG11Q96JI7 2443 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 SYT5O00445 386 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 FADS1O60427 444 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 NPHS1O60500 1241 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 SKAP2O75563 359 aaPredicted RBP12.46□□□□□ -0.41
RAB40B-204ENST00000571554 SLITRK5O94991 958 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 IGKV1D-16P01601 117 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 NEFHP12036 1026 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 CPN1P15169 458 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 HK1P19367 917 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 CTSSP25774 331 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 CLDN18P56856 261 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 MRPS22P82650 360 aaKnown RBP12.46□□□□□ -0.41
RAB40B-204ENST00000571554 SF3B4Q15427 424 aaKnown RBP eCLIP12.46□□□□□ -0.41
RAB40B-204ENST00000571554 UGT3A2Q3SY77 523 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 CYP27C1Q4G0S4 372 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 RAET1LQ5VY80 246 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 LUZP2Q86TE4 346 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 RIBC1Q8N443 379 aaPredicted RBP12.46□□□□□ -0.41
RAB40B-204ENST00000571554 OR2M3Q8NG83 312 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 GPR151Q8TDV0 419 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 SLC9A6Q92581 669 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 YIPF4Q9BSR8 244 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 LMF2Q9BU23 707 aaKnown RBP12.46□□□□□ -0.41
RAB40B-204ENST00000571554 TRMOQ9BU70 441 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 C1orf50Q9BV19 199 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 LIME1Q9H400 295 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 DNAJB12Q9NXW2 375 aaKnown RBP12.46□□□□□ -0.41
RAB40B-204ENST00000571554 ZNF629Q9UEG4 869 aaPredicted RBP12.46□□□□□ -0.41
RAB40B-204ENST00000571554 WBP11Q9Y2W2 641 aaKnown RBP12.46□□□□□ -0.41
RAB40B-204ENST00000571554 TRAF6Q9Y4K3 522 aa12.46□□□□□ -0.41
RAB40B-204ENST00000571554 F8P00451 2351 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 SHISA8B8ZZ34 492 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 NPIPB8E9PQR5 432 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 H0YC42 278 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 PEX11AO75192 247 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 SLU7O95391 586 aaKnown RBP12.45□□□□□ -0.42
RAB40B-204ENST00000571554 UTS2O95399 124 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 IL33O95760 270 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 ACP2P11117 423 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms