RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	NEIL2	Q969S2	332 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	CREB3L1	Q96BA8	519 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	SGPP1	Q9BX95	441 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	C1QTNF2	Q9BXJ5	285 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	EBPL	Q9BY08	206 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	WDR26	Q9H7D7	661 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	PPP1R3E	Q9H7J1	279 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	FOLH1B	Q9HBA9	442 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	B3GAT2	Q9NPZ5	323 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	FAM120C	Q9NX05	1096 aa	Known RBP	11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	COMMD3	Q9UBI1	195 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	PHF11	Q9UIL8	331 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	RAB23	Q9ULC3	237 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	SCML1	Q9UN30	329 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	SH2B3	Q9UQQ2	575 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820		H0YIV9	168 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	SCN2B	O60939	215 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	KLF8	O95600	359 aa	Predicted RBP	11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	PAK4	O96013	591 aa	Predicted RBP	11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	ADPRH	P54922	357 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	WNT3	P56703	355 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	RPS21	P63220	83 aa	Known RBP	11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	NCF4	Q15080	339 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	P2RY14	Q15391	338 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	GRK1	Q15835	563 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	UGT8	Q16880	541 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	COL28A1	Q2UY09	1125 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	KLHL22	Q53GT1	634 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	FRMPD2B	Q6IN97	320 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	ADNP2	Q6IQ32	1131 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	TFAP2E	Q6VUC0	442 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	ZNF730	Q6ZMV8	503 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	SLCO4C1	Q6ZQN7	724 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	TMPRSS9	Q7Z410	1059 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	SYT12	Q8IV01	421 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	LAS2	Q8IYD9	372 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	LRRC17	Q8N6Y2	441 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	LMNTD1	Q8N9Z9	388 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	AQP11	Q8NBQ7	271 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	C11orf65	Q8NCR3	313 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	SLC9A6	Q92581	669 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	FCRL1	Q96LA6	429 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	TMEM43	Q9BTV4	400 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	FBRS	Q9HAH7	460 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	FZD3	Q9NPG1	666 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	C11orf16	Q9NQ32	467 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	DNAJC27	Q9NZQ0	273 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	PCOLCE2	Q9UKZ9	415 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	SNX11	Q9Y5W9	270 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	CDH10	Q9Y6N8	788 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	PIAS3	Q9Y6X2	628 aa		11.27	□□□□□ -0.61
SPG7-222	ENST00000569820	TLR4	O00206	839 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	GATC	O43716	136 aa	Known RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	CHP2	O43745	196 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	IFNA7	P01567	189 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	RRAS	P10301	218 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	AMD1	P17707	334 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	ZP3	P21754	424 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	CCT3	P49368	545 aa	Known RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	TAP2	Q03519	686 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	FCN2	Q15485	313 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	CLLU1	Q5K131	121 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	GPR139	Q6DWJ6	353 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	KIAA1161	Q6NSJ0	714 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	NOXRED1	Q6NXP6	359 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	OR14C36	Q8NHC7	312 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	GANC	Q8TET4	914 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	MED18	Q9BUE0	208 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	KATNB1	Q9BVA0	655 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	SHARPIN	Q9H0F6	387 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	MED28	Q9H204	178 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	CHST8	Q9H2A9	424 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	SAV1	Q9H4B6	383 aa	Predicted RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	SDHAF3	Q9NRP4	125 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	CORO2B	Q9UQ03	480 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	NCKAP1	Q9Y2A7	1128 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820		A0A1W2PQU0	124 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	C2CD4D	B7Z1M9	353 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820		J3KTA2	159 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	GCM2	O75603	506 aa	Predicted RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	CHRM5	P08912	532 aa	Predicted RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	ACPP	P15309	386 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	NPPB	P16860	134 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	ZNF3	P17036	446 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	IGFALS	P35858	605 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	DGKE	P52429	567 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	FGFBP1	Q14512	234 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	RGN	Q15493	299 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	CCDC85B	Q15834	202 aa	Predicted RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	IER5L	Q5T953	404 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	METRNL	Q641Q3	311 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	ZNF57	Q68EA5	555 aa	Predicted RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	PAQR6	Q6TCH4	344 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	METAP1D	Q6UB28	335 aa	Predicted RBP	11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	USP30	Q70CQ3	517 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	KRT77	Q7Z794	578 aa		11.26	□□□□□ -0.61
SPG7-222	ENST00000569820	TMPRSS11B	Q86T26	416 aa		11.26	□□□□□ -0.61

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