RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 S100A14Q9HCY8 104 aa6.26□□□□□ -1.41
SMG1-217ENST00000569764 GNPTGQ9UJJ9 305 aa6.26□□□□□ -1.41
SMG1-217ENST00000569764 HS3ST2Q9Y278 367 aa6.26□□□□□ -1.41
SMG1-217ENST00000569764 ASF1AQ9Y294 204 aa6.26□□□□□ -1.41
SMG1-217ENST00000569764 FNDC1Q4ZHG4 1894 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 A0A1W2PQ72 361 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 METTL21EPA6NDL7 271 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 MMP20O60882 483 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TAC1P20366 129 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 EFNA1P20827 205 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 ID1P41134 155 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 GRM7Q14831 915 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 C16orf72Q14CZ0 275 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 LRRC36Q1X8D7 754 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SFRP5Q5T4F7 317 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 GPR107Q5VW38 600 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TMIGD1Q6UXZ0 262 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ZNF534Q76KX8 674 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ZNF546Q86UE3 836 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PDZD3Q86UT5 571 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 FAM219AQ8IW50 185 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TMEM104Q8NE00 496 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 NEK7Q8TDX7 302 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SNX33Q8WV41 574 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 C22orf15Q8WYQ4 148 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ELMO1Q92556 727 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 BIRC7Q96CA5 298 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 BTBD9Q96Q07 612 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 MED20Q9H944 212 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PLGRKTQ9HBL7 147 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 FBXL3Q9UKT7 428 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 COL4A6Q14031 1691 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 A0A1W2PPM1 405 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TRIM77I1YAP6 450 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TRAFD1O14545 582 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 AP2A2O94973 939 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ENO3P13929 434 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 SRMP19623 302 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 FOXN2P32314 431 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TGFBR2P37173 567 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CTSKP43235 329 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 HHEXQ03014 270 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PTSQ03393 145 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ITIH4Q14624 930 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CARTPTQ16568 116 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CDKN3Q16667 212 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TIGD2Q4W5G0 525 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 RAB41Q5JT25 222 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ARHGAP40Q5TG30 622 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 NCBP2-AS2Q69YL0 99 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TMEM211Q6ICI0 200 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 NUDT10Q8NFP7 164 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 LHFPL5Q8TAF8 219 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SLC25A36Q96CQ1 311 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 RPP25Q9BUL9 199 aaKnown RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 PLA2G2FQ9BZM2 168 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 MUC13Q9H3R2 512 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TIGARQ9NQ88 270 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SIRT3Q9NTG7 399 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 OSER1Q9NX31 292 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PSMD13Q9UNM6 376 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CACNA1BQ00975 2339 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 DOCK6Q96HP0 2047 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 A0A1W2PRG6 482 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 APOC4-APOC2K7ER74 178 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 IFNL4K9M1U5 179 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ZNF701M0R085 212 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 ERVH48-1M5A8F1 160 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 RGS10O43665 173 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 STX11O75558 287 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 FAM155BO75949 473 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 APOC2P02655 101 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ZDHHC11BP0C7U3 371 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PNLIPP16233 465 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 UCP1P25874 307 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PSMB10P40306 273 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CDH15P55291 814 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 OC90Q02509 493 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 CHRNEQ04844 493 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TRAF2Q12933 501 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TEX44Q53QW1 395 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PDZK1Q5T2W1 519 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 DHFR2Q86XF0 187 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 METTL4Q8N3J2 472 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 RIBC1Q8N443 379 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 TMEM156Q8N614 296 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 NPWQ8N729 165 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 C19orf47Q8N9M1 422 aaKnown RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 OR9K2Q8NGE7 335 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 HM13Q8TCT9 377 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ZNF398Q8TD17 642 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 NPY6RQ99463 290 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TIMM29Q9BSF4 260 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TWSG1Q9GZX9 223 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 EPN3Q9H201 632 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CRISPLD1Q9H336 500 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CLMPQ9H6B4 373 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 GPAMQ9HCL2 828 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CLEC2DQ9UHP7 191 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms