RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PGS1Q32NB8 556 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 RPTNQ6XPR3 784 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 MAMDC2Q7Z304 686 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 SPATA19Q7Z5L4 167 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 MRGPRGQ86SM5 289 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 ZNF808Q8N4W9 903 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 OR8J2Q8NGG1 315 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 NEIL3Q8TAT5 605 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 GPR151Q8TDV0 419 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 PHF10Q8WUB8 498 aaKnown RBP12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 RNF138Q8WVD3 245 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 SLC9A6Q92581 669 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 TP63Q9H3D4 680 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 NEUROD4Q9HD90 331 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 ZCCHC3Q9NUD5 404 aaKnown RBP12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 ACAD8Q9UKU7 415 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 C15orf41Q9Y2V0 281 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 HRH3Q9Y5N1 445 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 SNX8Q9Y5X2 465 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 GOLGA8QA0A0J9YX86 632 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 GOLGA8OA6NCC3 632 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 GOLGA8NF8WBI6 632 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 ADAM10O14672 748 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 ANKRD28O15084 1053 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 CFLARO15519 480 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 CLDN1O95832 211 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 HMGN2P05204 90 aaKnown RBP12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 ALOX5P09917 674 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 EPHA3P29320 983 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 SMSP52788 366 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 CLNS1AP54105 237 aaKnown RBP12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 ADORA2A-AS1P86434 159 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 TOMM20Q15388 145 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 EMC4Q5J8M3 183 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 WLSQ5T9L3 541 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 TMEM211Q6ICI0 200 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 OR4F3Q6IEY1 312 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 MFSD12Q6NUT3 480 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 XKRXQ6PP77 449 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 C3P1Q6ZMU1 363 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 WDSUB1Q8N9V3 476 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 SLC16A11Q8NCK7 471 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 VPS37AQ8NEZ2 397 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 LRRC8CQ8TDW0 803 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 ITLN2Q8WWU7 325 aaPredicted RBP12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 PIK3R3Q92569 461 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 TESCQ96BS2 214 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 MOAP1Q96BY2 351 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 DTNBP1Q96EV8 351 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 C16orf58Q96GQ5 468 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 MAELQ96JY0 434 aaKnown RBP12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 DMRTA2Q96SC8 542 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 SLC6A15Q9H2J7 730 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 WDR55Q9H6Y2 383 aaPredicted RBP12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 CXorf36Q9H7Y0 433 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 PNPLA3Q9NST1 481 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 WIF1Q9Y5W5 379 aa12.61□□□□□ -0.39
HERPUD1-218ENST00000569569 GXYLT2A0PJZ3 443 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 FIGNL2A6NMB9 653 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 RNASET2O00584 256 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 FADS1O60427 444 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 SOX30O94993 753 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 ALDOCP09972 364 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 ACP2P11117 423 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 AGAP20933 346 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 ENDOUP21128 410 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 EVI2BP34910 448 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 KIR3DL1P43629 444 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 RFX3P48380 749 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 TRPC1P48995 793 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 CLK3P49761 638 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 GAS1P54826 345 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 WNT3P56703 355 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 PPP2R2AP63151 447 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 HBA1P69905 142 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 LASP1Q14847 261 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 DPY19L1Q2PZI1 675 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 EXOSC6Q5RKV6 272 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 ANXA8L1Q5VT79 327 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 ZNF585AQ6P3V2 769 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 BHLHB9Q6PI77 547 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 PLCZ1Q86YW0 608 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 OR56A1Q8NGH5 318 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 OR5M9Q8NGP3 310 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 SFXN5Q8TD22 340 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 DYDC1Q8WWB3 177 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 RMND5BQ96G75 393 aaPredicted RBP12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 C7orf26Q96N11 449 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 STACQ99469 402 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 YIPF4Q9BSR8 244 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 SDHAF3Q9NRP4 125 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 AIG1Q9NVV5 245 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 GIN1Q9NXP7 522 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 SPRR3Q9UBC9 169 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 TNFRSF10DQ9UBN6 386 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 PCDHGB4Q9UN71 923 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 PCDHGB3Q9Y5G1 929 aa12.6□□□□□ -0.39
HERPUD1-218ENST00000569569 C15orf38-AP3S2A0A0A6YYH1 394 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms