RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PCDHAC2Q9Y5I4 1007 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 IGKV6D-41A0A0C4DH26 115 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 LOC102723532A0A0G2JNH3 316 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF98A6NK75 572 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SEC14L6B5MCN3 397 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PRNPP04156 253 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SPP1P10451 314 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ISL1P61371 349 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 HMGCS1Q01581 520 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SF1Q15637 639 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 YIF1BQ5BJH7 314 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 CCDC190Q86UF4 302 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 RGL4Q8IZJ4 473 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 OR6F1Q8NGZ6 308 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 TEX101Q9BY14 249 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PCTPQ9UKL6 214 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 FAM96BQ9Y3D0 163 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PSAT1Q9Y617 370 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 TMEM82A0PJX8 343 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 LOC730098B7Z3J9 87 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 GABARAPH6UMI1 98 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 NUPL2O15504 423 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 HLA-HP01893 362 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 METTL15P1P0C7V9 234 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 NCBP2P52298 156 aaKnown RBP eCLIP6.75□□□□□ -1.336e-15■□□□□ 10.1
CNOT1-216ENST00000569240 SLC26A5P58743 744 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 CAMK2BQ13554 666 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ENPP6Q6UWR7 440 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 CD300LGQ6UXG3 332 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ADPRHL1Q8NDY3 354 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 STEAP2Q8NFT2 490 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 OR56B2PQ8NGI1 322 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 OR52H1Q8NGJ2 320 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF461Q8TAF7 563 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PAQR8Q8TEZ7 354 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF559Q9BR84 538 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 GSTO2Q9H4Y5 243 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 CAPN10Q9HC96 672 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 MAP2P11137 1827 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SYN3O14994 580 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SCAMP2O15127 329 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SCGB1D2O95969 90 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ATP1B1P05026 303 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ADRB3P13945 408 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 AGXTP21549 392 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 F2RL1P55085 397 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 EXOSC2Q13868 293 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 GPR68Q15743 365 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 MLIPQ5VWP3 458 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 COMTD1Q86VU5 262 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 OR5W2Q8NH69 310 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SLC35B4Q969S0 331 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 NAA50Q9GZZ1 169 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ADAP2Q9NPF8 381 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 COQ3Q9NZJ6 369 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 POMT2Q9UKY4 750 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SCML2Q9UQR0 700 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 EEF1E1-BLOC1S5C9J1V9 151 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SOCS5O75159 536 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SCGB1D1O95968 90 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 HSPB3Q12988 150 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 GRB7Q14451 532 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 CRTC1Q6UUV9 634 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 GTF2H5Q6ZYL4 71 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 HORMAD2Q8N7B1 307 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 IL17RDQ8NFM7 739 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ALG8Q9BVK2 526 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 RXFP3Q9NSD7 469 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 DIP2BQ9P265 1576 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 MED6O75586 246 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 CALCBP10092 127 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 TRA2BP62995 288 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 IL13RA1P78552 427 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF91Q05481 1191 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SYT13Q7L8C5 426 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF467Q7Z7K2 595 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 RNF113BQ8IZP6 322 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 UMODL1-AS1Q8N2C9 162 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PDLIM5Q96HC4 596 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PRRC1Q96M27 445 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 RBP7Q96R05 134 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SMOC2Q9H3U7 446 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 BEX1Q9HBH7 125 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SERINC1Q9NRX5 453 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 MAN2C1Q9NTJ4 1040 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 CPED1A4D0V7 1026 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 I6L893 689 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 OR2T1O43869 369 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 DBIP07108 87 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ELFN1P0C7U0 828 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PRPS1P60891 318 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 MAXP61244 160 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 EEF1A1P68104 462 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 EEF1A2Q05639 463 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 EEF1A1P5Q5VTE0 462 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 KDM4DQ6B0I6 523 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ALG1LQ6GMV1 187 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ALKAL2Q6UX46 152 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PLEKHH3Q7Z736 793 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 TAC4Q86UU9 113 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms