RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, human

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAPC5-208	ENST00000568875	PLA2G2A	P14555	144 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	OR1D4	P47884	311 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	FOXL2	P58012	376 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	RPP38	P78345	283 aa	Known RBP	10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	PHEX	P78562	749 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	DDX39B	Q13838	428 aa	Known RBP	10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	RGS21	Q2M5E4	152 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ANKDD1A	Q495B1	522 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	UBE2U	Q5VVX9	321 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	PRAMEF13	Q5VWM6	474 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TCTN3	Q6NUS6	607 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TRIM40	Q6P9F5	258 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	IKBIP	Q70UQ0	350 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	COX15	Q7KZN9	410 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	P2RY8	Q86VZ1	359 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	RNF175	Q8N4F7	328 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ZNF540	Q8NDQ6	660 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	OR10Q1	Q8NGQ4	319 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	PHF10	Q8WUB8	498 aa	Known RBP	10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	MYNN	Q9NPC7	610 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ACOT13	Q9NPJ3	140 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	SH2B3	Q9UQQ2	575 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	DYRK1B	Q9Y463	629 aa		10.83	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TENM4	Q6N022	2769 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	PCSK5	Q92824	1860 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	GNG14	A0A1W2PPG7	69 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ARGFX	A6NJG6	315 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TMEM229A	B2RXF0	380 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	MKRN2OS	H3BPM6	223 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875		M0R3G1	203 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	KPNA4	O00629	521 aa	Predicted RBP	10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	HAT1	O14929	419 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	FAM20B	O75063	409 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CCL11	P51671	97 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	HMGA2	P52926	109 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	MVD	P53602	400 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CRYBA2	P53672	197 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	RPS13	P62277	151 aa	Known RBP	10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TUBA1B	P68363	451 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CSNK1G2	P78368	415 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	PIGF	Q07326	219 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ZNF630	Q2M218	657 aa	Predicted RBP	10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	IFI44L	Q53G44	452 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	NIPAL1	Q6NVV3	410 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	LCTL	Q6UWM7	567 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	MED25	Q71SY5	747 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TUBA1A	Q71U36	451 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	PLD3	Q8IV08	490 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	OR4A15	Q8NGL6	344 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	NEIL2	Q969S2	332 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	NACC2	Q96BF6	587 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	C10orf90	Q96M02	699 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	IP6K3	Q96PC2	410 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ZNF300	Q96RE9	604 aa	Predicted RBP	10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	RUBCNL	Q9H714	662 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	WDR54	Q9H977	334 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	AKIP1	Q9NQ31	210 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	EXO1	Q9UQ84	846 aa	Known RBP	10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	RELN	P78509	3460 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CNTRL	Q7Z7A1	2325 aa		10.82	□□□□□ -0.68
SNAPC5-208	ENST00000568875	MYO18B	Q8IUG5	2567 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ARRDC5	A6NEK1	342 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	VSTM2B	A6NLU5	285 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TBX19	O60806	448 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	WBP4	O75554	376 aa	Known RBP	10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CEACAM4	O75871	244 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	KRT75	O95678	551 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	OCM2	P0CE71	109 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	OCM	P0CE72	109 aa	Predicted RBP	10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	DDX5	P17844	614 aa	Known RBP	10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	FMO3	P31513	532 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	OTX2	P32243	289 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	GGT2	P36268	569 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	FOLR3	P41439	243 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CHAF1B	Q13112	559 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	GAB1	Q13480	694 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ATP1A4	Q13733	1029 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CRB2	Q5IJ48	1285 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	GCNT6	Q5T4J0	391 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	GARNL3	Q5VVW2	1013 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	FAM71E1	Q6IPT2	247 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ADCK2	Q7Z695	626 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	C17orf64	Q86WR6	236 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	RAB43	Q86YS6	212 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	DEPDC4	Q8N2C3	294 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CENPS	Q8N2Z9	138 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	METTL4	Q8N3J2	472 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	CSNK1A1L	Q8N752	337 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	OR4K1	Q8NGD4	311 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	MYDGF	Q969H8	173 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	MVB12A	Q96EY5	273 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TPD52L3	Q96J77	140 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	DACH2	Q96NX9	599 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	SPSB2	Q99619	263 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	ZNF304	Q9HCX3	659 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	DMRT3	Q9NQL9	472 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	NDUFAF4	Q9P032	175 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	SH3BP4	Q9P0V3	963 aa		10.81	□□□□□ -0.68
SNAPC5-208	ENST00000568875	TP53TG5	Q9Y2B4	290 aa		10.81	□□□□□ -0.68

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