RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 MEX3DQ86XN8 651 aaKnown RBP9.02□□□□□ -0.97
TCF4-240ENST00000568673 NKAIN4Q8IVV8 208 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 OR4N5Q8IXE1 308 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 TOR1AIP2Q8NFQ8 470 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 OR8D4Q8NGM9 314 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 PIGXQ8TBF5 258 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 ZFPM2Q8WW38 1151 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 CDS1Q92903 461 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 FAM46AQ96IP4 442 aaKnown RBP9.02□□□□□ -0.97
TCF4-240ENST00000568673 PRRG3Q9BZD7 231 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 FGF20Q9NP95 211 aaPredicted RBP9.02□□□□□ -0.97
TCF4-240ENST00000568673 ACTR10Q9NZ32 417 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 CNIH4Q9P003 139 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 WDR45Q9Y484 360 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 PCDHGB6Q9Y5F9 930 aa9.02□□□□□ -0.97
TCF4-240ENST00000568673 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 OR6C74A6NCV1 312 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 ZNF670-ZNF695F2Z2N8 137 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 WWP2O00308 870 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 CTDSP2O14595 271 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 UBXN7O94888 489 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 OR5F1O95221 314 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 THY1P04216 161 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 CPMP14384 443 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 ALOX12P18054 663 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 MYL12AP19105 171 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 NDUFV2P19404 249 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 FPR3P25089 353 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 SOX18P35713 384 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 STAT5AP42229 794 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 MTNR1AP48039 350 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 SEPHS1P49903 392 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 TPMTP51580 245 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 MRPS21P82921 87 aaKnown RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 HOXC5Q00444 222 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 BNC1Q01954 994 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 LARS2Q15031 903 aaKnown RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 ALG11Q2TAA5 492 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 KIAA1324Q6UXG2 1013 aaKnown RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 PEX5LQ8IYB4 626 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 DNAJC5GQ8N7S2 189 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 POC5Q8NA72 575 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 SIMC1Q8NDZ2 872 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 ANKK1Q8NFD2 765 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 OR10G6Q8NH81 332 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 RNFT2Q96EX2 444 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 SLC41A3Q96GZ6 507 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 MCHR1Q99705 422 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 ZFYVE21Q9BQ24 234 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 KCNS3Q9BQ31 491 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 CHCHD3Q9NX63 227 aaKnown RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 IL20Q9NYY1 176 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 ZNF229Q9UJW7 825 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 SSR3Q9UNL2 185 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 ZNF443Q9Y2A4 671 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 ARHGEF17Q96PE2 2063 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 LOC105369274A0A096LPK9 316 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 LOC102723532A0A0G2JNH3 316 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 TMEM129A0AVI4 362 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 LRRC72A6NJI9 287 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 LOC110117498-PIK3R3F6TDL0 507 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 ZSCAN9O15535 394 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 CPEP16870 476 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 GTF2E2P29084 291 aaKnown RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 MAGEA10P43363 369 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 RORCP51449 518 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 WNT4P56705 351 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 MAP4K2Q12851 820 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 DUSP8Q13202 625 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 COL9A2Q14055 689 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 DUSP5Q16690 384 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 MINDY4Q4G0A6 757 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 PLEKHM3Q6ZWE6 761 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 MBOAT2Q6ZWT7 520 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 GDF7Q7Z4P5 450 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 TRIM48Q8IWZ4 208 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 OR4N4Q8N0Y3 316 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 FAM83FQ8NEG4 500 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 FLCNQ8NFG4 579 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 PIK3R3Q92569 461 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 OSTF1Q92882 214 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 TRMT61AQ96FX7 289 aaKnown RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 SDF2Q99470 211 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 SLC30A2Q9BRI3 323 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 CACYBPQ9HB71 228 aaKnown RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 LYRM4Q9HD34 91 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 NLGN3Q9NZ94 848 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 C19orf53Q9UNZ5 99 aaPredicted RBP9.01□□□□□ -0.97
TCF4-240ENST00000568673 GPR52Q9Y2T5 361 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 ENTPD2Q9Y5L3 495 aa9.01□□□□□ -0.97
TCF4-240ENST00000568673 KDM4EB2RXH2 506 aaPredicted RBP9□□□□□ -0.97
TCF4-240ENST00000568673 H0YGG7 62 aa9□□□□□ -0.97
TCF4-240ENST00000568673 KLF4O43474 513 aa9□□□□□ -0.97
TCF4-240ENST00000568673 NTN1O95631 604 aa9□□□□□ -0.97
TCF4-240ENST00000568673 PTTG1O95997 202 aa9□□□□□ -0.97
TCF4-240ENST00000568673 AKT2P31751 481 aa9□□□□□ -0.97
TCF4-240ENST00000568673 ARF3P61204 181 aaPredicted RBP9□□□□□ -0.97
TCF4-240ENST00000568673 ILF3Q12906 894 aaKnown RBP eCLIP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms