RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 EGLN2Q96KS0 407 aa17.13■□□□□ 0.33
SPSB3-210ENST00000568416 DDX18Q9NVP1 670 aaKnown RBP17.13■□□□□ 0.33
SPSB3-210ENST00000568416 PPP4R1LQ9P1A2 415 aa17.13■□□□□ 0.33
SPSB3-210ENST00000568416 RPH3AQ9Y2J0 694 aaPredicted RBP17.13■□□□□ 0.33
SPSB3-210ENST00000568416 COPEO14579 308 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 SCO2O43819 266 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 GAB1Q13480 694 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 LIPMQ5VYY2 423 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 CLEC6AQ6EIG7 209 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 CCDC63Q8NA47 563 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 LINC01560Q8TB33 94 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 EPS8L3Q8TE67 593 aaKnown RBP17.12■□□□□ 0.33
SPSB3-210ENST00000568416 INTS12Q96CB8 462 aaKnown RBP17.12■□□□□ 0.33
SPSB3-210ENST00000568416 LMF2Q9BU23 707 aaKnown RBP17.12■□□□□ 0.33
SPSB3-210ENST00000568416 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 DSN1Q9H410 356 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 Q9N2J8 555 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 FLRT3Q9NZU0 649 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 ABCG2Q9UNQ0 655 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 PTGDR2Q9Y5Y4 395 aa17.12■□□□□ 0.33
SPSB3-210ENST00000568416 SMIM23A6NLE4 172 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 SLC28A1O00337 649 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 SEC22BO75396 215 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 IL33O95760 270 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 KRT4P19013 534 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 TCEA1P23193 301 aaKnown RBP17.11■□□□□ 0.33
SPSB3-210ENST00000568416 SLC18A2Q05940 514 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 DECR1Q16698 335 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 RNF165Q6ZSG1 346 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 GCNT2Q8N0V5 402 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 GOT1L1Q8NHS2 421 aaPredicted RBP17.11■□□□□ 0.33
SPSB3-210ENST00000568416 ZNF764Q96H86 408 aaPredicted RBP17.11■□□□□ 0.33
SPSB3-210ENST00000568416 FCRL1Q96LA6 429 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 RBM24Q9BX46 236 aaKnown RBP17.11■□□□□ 0.33
SPSB3-210ENST00000568416 RTN4RQ9BZR6 473 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 PIGMQ9H3S5 423 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 SDHAF3Q9NRP4 125 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 C1orf109Q9NX04 203 aa17.11■□□□□ 0.33
SPSB3-210ENST00000568416 GOSR1O95249 250 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 TGM6O95932 706 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 FREM3P0C091 2139 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 PEPDP12955 493 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 EEF1A1P68104 462 aaKnown RBP17.1■□□□□ 0.33
SPSB3-210ENST00000568416 PCLAFQ15004 111 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 ZNHIT3Q15649 155 aaPredicted RBP17.1■□□□□ 0.33
SPSB3-210ENST00000568416 EEF1A1P5Q5VTE0 462 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 Q6ZSR9 355 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 ZNF551Q7Z340 670 aaPredicted RBP17.1■□□□□ 0.33
SPSB3-210ENST00000568416 LUZP2Q86TE4 346 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 GRAMD2AQ8IUY3 354 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 C10orf107Q8IVU9 208 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 C4orf33Q8N1A6 199 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 OR2T11Q8NH01 316 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 LRTM1Q9HBL6 345 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 FAM120CQ9NX05 1096 aaKnown RBP17.1■□□□□ 0.33
SPSB3-210ENST00000568416 GALNT8Q9NY28 637 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 MED11Q9P086 117 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 MID2Q9UJV3 735 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 MRTO4Q9UKD2 239 aaKnown RBP17.1■□□□□ 0.33
SPSB3-210ENST00000568416 F8P00451 2351 aa17.1■□□□□ 0.33
SPSB3-210ENST00000568416 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 TTC36A6NLP5 189 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 AZIN1O14977 448 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 PDPK1O15530 556 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 RGS14O43566 566 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 TBX19O60806 448 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 TNFSF13O75888 250 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 HK1P19367 917 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 DNASE1P24855 282 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 CLDN15P56746 228 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 GANABQ14697 944 aaKnown RBP17.09■□□□□ 0.33
SPSB3-210ENST00000568416 HOXB13Q92826 284 aaPredicted RBP17.09■□□□□ 0.33
SPSB3-210ENST00000568416 GFM2Q969S9 779 aaKnown RBP17.09■□□□□ 0.33
SPSB3-210ENST00000568416 CCT7Q99832 543 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 TMUB1Q9BVT8 246 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 GATA5Q9BWX5 397 aaPredicted RBP17.09■□□□□ 0.33
SPSB3-210ENST00000568416 TUBB1Q9H4B7 451 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 PLEKHA6Q9Y2H5 1048 aa17.09■□□□□ 0.33
SPSB3-210ENST00000568416 CCDC168Q8NDH2 2452 aa17.08■□□□□ 0.33
SPSB3-210ENST00000568416 A0A1W2PNV4 684 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 A8MXE2 369 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 PRPS2P11908 318 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 NEFHP12036 1026 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 SDC1P18827 310 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 MAP3K8P41279 467 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 PSMD4P55036 377 aaKnown RBP17.08■□□□□ 0.32
SPSB3-210ENST00000568416 STX5Q13190 355 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 ZNF385BQ569K4 471 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 RAET1LQ5VY80 246 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 KANK2Q63ZY3 851 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 ANKRD26P1Q6NSI1 321 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 PAMR1Q6UXH9 720 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 MARCH3Q86UD3 253 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 DUSP19Q8WTR2 217 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 DACH2Q96NX9 599 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 TRMOQ9BU70 441 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 REEP4Q9H6H4 257 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 C3orf14Q9HBI5 128 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 MKS1Q9NXB0 559 aa17.08■□□□□ 0.32
SPSB3-210ENST00000568416 PACSIN3Q9UKS6 424 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms