RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 VPS26BQ4G0F5 336 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 UBAP2Q5T6F2 1119 aaKnown RBP16.88■□□□□ 0.29
LINC01238-205ENST00000567549 LUZP2Q86TE4 346 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 CCNYL1Q8N7R7 359 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 CDC26Q8NHZ8 85 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 AENQ8WTP8 325 aaKnown RBP16.88■□□□□ 0.29
LINC01238-205ENST00000567549 CAVIN3Q969G5 261 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 NEUROD4Q9HD90 331 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 GALNT8Q9NY28 637 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 TAS2R7Q9NYW3 318 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 CLCF1Q9UBD9 225 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 MID2Q9UJV3 735 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 RSL1D1O76021 490 aaKnown RBP16.87■□□□□ 0.29
LINC01238-205ENST00000567549 FCGR2AP12318 317 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 EVI2BP34910 448 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 CCT5P48643 541 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 LHX2P50458 406 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 AGFG1P52594 562 aaKnown RBP16.87■□□□□ 0.29
LINC01238-205ENST00000567549 CORO7P57737 925 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 RPS3AP61247 264 aaKnown RBP16.87■□□□□ 0.29
LINC01238-205ENST00000567549 DUSP2Q05923 314 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 BTKQ06187 659 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 TCHHL1Q5QJ38 904 aaPredicted RBP16.87■□□□□ 0.29
LINC01238-205ENST00000567549 FAM180BQ6P0A1 224 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 APIPQ96GX9 242 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 PIGQQ9BRB3 760 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 SLC39A3Q9BRY0 314 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 MYNNQ9NPC7 610 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 FANCFQ9NPI8 374 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 ZNF226Q9NYT6 803 aa16.87■□□□□ 0.29
LINC01238-205ENST00000567549 SLC22A20A6NK97 555 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 MYO1GB0I1T2 1018 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 KDM4EB2RXH2 506 aaPredicted RBP16.86■□□□□ 0.29
LINC01238-205ENST00000567549 HCRTR2O43614 444 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 KCNH1O95259 989 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 RAE1P78406 368 aaKnown RBP16.86■□□□□ 0.29
LINC01238-205ENST00000567549 OCRLQ01968 901 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 DEFB113Q30KQ7 82 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 GLYR1Q49A26 553 aaPredicted RBP16.86■□□□□ 0.29
LINC01238-205ENST00000567549 SH2D4BQ5SQS7 431 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 RAET1LQ5VY80 246 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 ZFP28Q8NHY6 868 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 LINC01560Q8TB33 94 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 GFM2Q969S9 779 aaKnown RBP16.86■□□□□ 0.29
LINC01238-205ENST00000567549 EFHD2Q96C19 240 aaPredicted RBP16.86■□□□□ 0.29
LINC01238-205ENST00000567549 EBPLQ9BY08 206 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 BEX4Q9NWD9 120 aaPredicted RBP16.86■□□□□ 0.29
LINC01238-205ENST00000567549 FAM120CQ9NX05 1096 aaKnown RBP16.86■□□□□ 0.29
LINC01238-205ENST00000567549 FBXL2Q9UKC9 423 aa16.86■□□□□ 0.29
LINC01238-205ENST00000567549 C19orf53Q9UNZ5 99 aaPredicted RBP16.86■□□□□ 0.29
LINC01238-205ENST00000567549 PRRC2AP48634 2157 aaKnown RBP16.85■□□□□ 0.29
LINC01238-205ENST00000567549 MTORP42345 2549 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 ARHGEF9O43307 516 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 TNFRSF21O75509 655 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 CHEK2O96017 543 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 JUNP05412 331 aaKnown RBP16.85■□□□□ 0.29
LINC01238-205ENST00000567549 PYGBP11216 843 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 CHN1P15882 459 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 CPOXP36551 454 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 SLCO1A2P46721 670 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 CLDN18P56856 261 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 DESI1Q6ICB0 168 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 ZYG11AQ6WRX3 759 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 GCNT2Q8N0V5 402 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 SIMC1Q8NDZ2 872 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 OR7G2Q8NG99 324 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 RNF138Q8WVD3 245 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 C11orf24Q96F05 449 aaPredicted RBP16.85■□□□□ 0.29
LINC01238-205ENST00000567549 TBL1XR1Q9BZK7 514 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 VIPAS39Q9H9C1 493 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 ZNF446Q9NWS9 450 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 PAQR5Q9NXK6 330 aaPredicted RBP16.85■□□□□ 0.29
LINC01238-205ENST00000567549 ELOVL5Q9NYP7 299 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 RPH3AQ9Y2J0 694 aaPredicted RBP16.85■□□□□ 0.29
LINC01238-205ENST00000567549 ZNF175Q9Y473 711 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 TIMM22Q9Y584 194 aa16.85■□□□□ 0.29
LINC01238-205ENST00000567549 SETD2Q9BYW2 2564 aaPredicted RBP16.85■□□□□ 0.29
LINC01238-205ENST00000567549 MED12LQ86YW9 2145 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 A0A1W2PNV4 684 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 A8MXE2 369 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 GOLGA8RI6L899 631 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 SCO2O43819 266 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 SMNDC1O75940 238 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC01238-205ENST00000567549 ATE1O95260 518 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 HK1P19367 917 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 SOX18P35713 384 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 MC3RP41968 323 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 STARP49675 285 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 HTR6P50406 440 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 PSG6Q00889 435 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 C17orf67Q0P5P2 114 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 FOXF2Q12947 444 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 SLC29A2Q14542 456 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 OR5M10Q6IEU7 315 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 NPSR1Q6W5P4 371 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 TRIM46Q7Z4K8 759 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 OR2L13Q8N349 312 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 CCDC63Q8NA47 563 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 LIME1Q9H400 295 aa16.84■□□□□ 0.29
LINC01238-205ENST00000567549 GSTO2Q9H4Y5 243 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms