RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 OTUB1Q96FW1 271 aaPredicted RBP14.71□□□□□ -0.05
COMMD4-215ENST00000566843 SLC35G5Q96KT7 338 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 IL21Q9HBE4 155 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 ACSS1Q9NUB1 689 aaPredicted RBP14.71□□□□□ -0.05
COMMD4-215ENST00000566843 ZFR2Q9UPR6 939 aaKnown RBP14.71□□□□□ -0.05
COMMD4-215ENST00000566843 CARNS1A5YM72 827 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 FAM170BA6NMN3 283 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 EEF1E1O43324 174 aaKnown RBP14.71□□□□□ -0.06
COMMD4-215ENST00000566843 SULT1A3P0DMM9 295 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 SULT1A4P0DMN0 295 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 PBLDP30039 288 aaPredicted RBP14.71□□□□□ -0.06
COMMD4-215ENST00000566843 ACSL1P33121 698 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 MAP4K2Q12851 820 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 UAP1L1Q3KQV9 507 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 TJAP1Q5JTD0 557 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 ADGRD2Q7Z7M1 963 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 GPAT4Q86UL3 456 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 MEX3DQ86XN8 651 aaKnown RBP14.71□□□□□ -0.06
COMMD4-215ENST00000566843 KLBQ86Z14 1044 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 ESX1Q8N693 406 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 LHFPL5Q8TAF8 219 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 ADAMTS14Q8WXS8 1223 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 NR4A3Q92570 626 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 ZNF689Q96CS4 500 aaPredicted RBP14.71□□□□□ -0.06
COMMD4-215ENST00000566843 LINC00597Q9H2U6 94 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 RHBGQ9H310 441 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 EPHX3Q9H6B9 360 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 PTGFRNQ9P2B2 879 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 FBXO9Q9UK97 447 aaPredicted RBP14.71□□□□□ -0.06
COMMD4-215ENST00000566843 LRFN2Q9ULH4 789 aa14.71□□□□□ -0.06
COMMD4-215ENST00000566843 PEPDP12955 493 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 PPP2R1BP30154 601 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 RPA4Q13156 261 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 KHDRBS2Q5VWX1 349 aaKnown RBP14.7□□□□□ -0.06
COMMD4-215ENST00000566843 CRIPAKQ8N1N5 446 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 BMPERQ8N8U9 685 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 GALNT11Q8NCW6 608 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 XAGE5Q8WWM1 108 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 MSANTD3Q96H12 275 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 ZSWIM3Q96MP5 696 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 CAMK1GQ96NX5 476 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 RBP7Q96R05 134 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 ABHD1Q96SE0 405 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 CLEC4MQ9H2X3 399 aaPredicted RBP14.7□□□□□ -0.06
COMMD4-215ENST00000566843 COPZ2Q9P299 210 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 CFAP97Q9P2B7 532 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 SLC25A13Q9UJS0 675 aa14.7□□□□□ -0.06
COMMD4-215ENST00000566843 TUBAL3A6NHL2 446 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 GPR171O14626 319 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 GRM6O15303 877 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 PI15O43692 258 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 TRIM23P36406 574 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 OMPP47874 163 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 FGFBP1Q14512 234 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 LCTLQ6UWM7 567 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 Q6ZVU0 165 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 KRT78Q8N1N4 520 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 OR5D16Q8NGK9 328 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 NXPE2Q96DL1 559 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 AIFM2Q9BRQ8 373 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 PINK1Q9BXM7 581 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 CRISPLD2Q9H0B8 497 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 KCNK12Q9HB15 430 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 DLL4Q9NR61 685 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 ZNF624Q9P2J8 865 aaPredicted RBP14.69□□□□□ -0.06
COMMD4-215ENST00000566843 NPTNQ9Y639 398 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 TSPAN11A1L157 253 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 RTCAO00442 366 aaKnown RBP14.69□□□□□ -0.06
COMMD4-215ENST00000566843 TIMP2P16035 220 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 STAT5AP42229 794 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 PUDPQ08623 228 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 ZNF267Q14586 743 aaPredicted RBP14.69□□□□□ -0.06
COMMD4-215ENST00000566843 KIAA1161Q6NSJ0 714 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 RTL4Q6ZR62 310 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 PRSS42Q7Z5A4 293 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 CMIPQ8IY22 773 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 SAMD12Q8N8I0 201 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 OR2A12Q8NGT7 310 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 OSTF1Q92882 214 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 EXOSC8Q96B26 276 aaKnown RBP14.69□□□□□ -0.06
COMMD4-215ENST00000566843 MS4A8Q9BY19 250 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 ZNF275Q9NSD4 429 aaPredicted RBP14.69□□□□□ -0.06
COMMD4-215ENST00000566843 C5AR2Q9P296 337 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 PCDH10Q9P2E7 1040 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 SCP2D1Q9UJQ7 156 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 ENTPD4Q9Y227 616 aa14.69□□□□□ -0.06
COMMD4-215ENST00000566843 SIRT4Q9Y6E7 314 aaPredicted RBP14.69□□□□□ -0.06
COMMD4-215ENST00000566843 COL4A6Q14031 1691 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 HOXA2O43364 376 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 CHRM4P08173 479 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 UGT2B7P16662 529 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 MMP12P39900 470 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 SRP9P49458 86 aaKnown RBP14.68□□□□□ -0.06
COMMD4-215ENST00000566843 TLE2Q04725 743 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 GALEQ14376 348 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 TRAM2Q15035 370 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 GSG1Q2KHT4 349 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 CLEC12AQ5QGZ9 265 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 PRAMEF14Q5SWL7 426 aa14.68□□□□□ -0.06
COMMD4-215ENST00000566843 PRAMEF13Q5VWM6 474 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms