RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 DOCK7Q96N67 2140 aa13.56□□□□□ -0.24
RNF40-209ENST00000566703 DSN1Q9H410 356 aa13.56□□□□□ -0.24
RNF40-209ENST00000566703 PPP4R1LQ9P1A2 415 aa13.56□□□□□ -0.24
RNF40-209ENST00000566703 C19orf53Q9UNZ5 99 aaPredicted RBP13.56□□□□□ -0.24
RNF40-209ENST00000566703 EIF3LQ9Y262 564 aaKnown RBP13.56□□□□□ -0.24
RNF40-209ENST00000566703 TIMM22Q9Y584 194 aa13.56□□□□□ -0.24
RNF40-209ENST00000566703 ANKHD1Q8IWZ3 2542 aaKnown RBP13.55□□□□□ -0.24
RNF40-209ENST00000566703 RIPK2O43353 540 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 NME6O75414 186 aaPredicted RBP13.55□□□□□ -0.24
RNF40-209ENST00000566703 HOXB4P17483 251 aaPredicted RBP13.55□□□□□ -0.24
RNF40-209ENST00000566703 CD53P19397 219 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 EVI2BP34910 448 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 CLK3P49761 638 aaKnown RBP13.55□□□□□ -0.24
RNF40-209ENST00000566703 FGFBP1Q14512 234 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 DECR1Q16698 335 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 SPDYAQ5MJ70 313 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 SHEQ5VZ18 495 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 FAM219BQ5XKK7 198 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 FAM71E1Q6IPT2 247 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 IFT20Q8IY31 132 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 OR2M3Q8NG83 312 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 EFHD2Q96C19 240 aaPredicted RBP13.55□□□□□ -0.24
RNF40-209ENST00000566703 STARD4Q96DR4 205 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 GSTO2Q9H4Y5 243 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 PTGES2Q9H7Z7 377 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 HHATLQ9HCP6 504 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 Q9N2J8 555 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 MYNNQ9NPC7 610 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 MIEF1Q9NQG6 463 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 FAM120CQ9NX05 1096 aaKnown RBP13.55□□□□□ -0.24
RNF40-209ENST00000566703 ELOVL5Q9NYP7 299 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 TESMINQ9Y4I5 508 aa13.55□□□□□ -0.24
RNF40-209ENST00000566703 SLC22A20A6NK97 555 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 B4DXG7 233 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 PSMG1O95456 288 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 IL33O95760 270 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 PYGBP11216 843 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 HK1P19367 917 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 NCBP2P52298 156 aaKnown RBP eCLIP13.54□□□□□ -0.24
RNF40-209ENST00000566703 PSMD4P55036 377 aaKnown RBP13.54□□□□□ -0.24
RNF40-209ENST00000566703 ZNHIT3Q15649 155 aaPredicted RBP13.54□□□□□ -0.24
RNF40-209ENST00000566703 IMPG1Q17R60 797 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 BIVMQ86UB2 503 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 OR2L13Q8N349 312 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 ZNF592Q92610 1267 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 ELP4Q96EB1 424 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 PIP5K1AQ99755 562 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 SLC39A3Q9BRY0 314 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 EBPLQ9BY08 206 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 GLIPR2Q9H4G4 154 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 C3orf14Q9HBI5 128 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 MID1IP1Q9NPA3 183 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 RRAGDQ9NQL2 400 aaPredicted RBP13.54□□□□□ -0.24
RNF40-209ENST00000566703 ZNF226Q9NYT6 803 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 ZNF175Q9Y473 711 aa13.54□□□□□ -0.24
RNF40-209ENST00000566703 AKAP6Q13023 2319 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 IGLV3-32A0A0A0MS00 114 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 GOLGA8RI6L899 631 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 UPK1AO00322 258 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 UBFD1O14562 309 aaKnown RBP13.53□□□□□ -0.24
RNF40-209ENST00000566703 CTIFO43310 598 aaKnown RBP13.53□□□□□ -0.24
RNF40-209ENST00000566703 EMC8O43402 210 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 SCO2O43819 266 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 JUNP05412 331 aaKnown RBP13.53□□□□□ -0.24
RNF40-209ENST00000566703 NTSP30990 170 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 CD79BP40259 229 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 MC3RP41968 323 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 KIR2DL2P43627 348 aaPredicted RBP13.53□□□□□ -0.24
RNF40-209ENST00000566703 CLDN15P56746 228 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 C17orf67Q0P5P2 114 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 ZNF155Q12901 538 aaPredicted RBP13.53□□□□□ -0.24
RNF40-209ENST00000566703 PRSS53Q2L4Q9 553 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 SH2D4BQ5SQS7 431 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 PLXDC2Q6UX71 529 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 ZYG11AQ6WRX3 759 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 IKBIPQ70UQ0 350 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 BTLAQ7Z6A9 289 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 HOMEZQ8IX15 550 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 CCNYL1Q8N7R7 359 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 DUSP19Q8WTR2 217 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 PGM2Q96G03 612 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 AMDHD1Q96NU7 426 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 WFIKKN1Q96NZ8 548 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 KCNA7Q96RP8 456 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 PIGQQ9BRB3 760 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 LMF2Q9BU23 707 aaKnown RBP13.53□□□□□ -0.24
RNF40-209ENST00000566703 GSX1Q9H4S2 264 aaPredicted RBP13.53□□□□□ -0.24
RNF40-209ENST00000566703 MED11Q9P086 117 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 PSMC3IPQ9P2W1 217 aaPredicted RBP13.53□□□□□ -0.24
RNF40-209ENST00000566703 STOML1Q9UBI4 398 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 ZNF337Q9Y3M9 751 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
RNF40-209ENST00000566703 MED12Q93074 2177 aa13.52□□□□□ -0.24
RNF40-209ENST00000566703 A0A1W2PPR1 153 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 OR2M5A3KFT3 312 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 NPIPB8E9PQR5 432 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 G3V2L1 256 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 ARHGEF9O43307 516 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 GLRA3O75311 464 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms