RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PDZK1IP1Q13113 114 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 SCGB2A2Q13296 93 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 TIMM50Q3ZCQ8 353 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 ARSKQ6UWY0 536 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 BTNL3Q6UXE8 466 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 CATSPER4Q7RTX7 472 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 SERINC5Q86VE9 423 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 ERICH1Q86X53 443 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 ERC1Q8IUD2 1116 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 EFCAB13Q8IY85 973 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 SLC39A11Q8N1S5 342 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 VN1R17PQ8TDU5 208 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 PINX1Q96BK5 328 aaKnown RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 VSTM2LQ96N03 204 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 LIN28AQ9H9Z2 209 aaKnown RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 MEPEQ9NQ76 525 aaPredicted RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.41□□□□□ -1.86
CHD9-215ENST00000565442 FAM120CQ9NX05 1096 aaKnown RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 IMPAD1Q9NX62 359 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 RSPH14Q9UHP6 348 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 EXOSC1Q9Y3B2 195 aaKnown RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 TRBV7-9A0A0J9YWB2 115 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 WASH3PC4AMC7 463 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 G3V3Y1 287 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 K7EPI3 171 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 CHADO15335 359 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 PPIHO43447 177 aaKnown RBP3.4□□□□□ -1.87
CHD9-215ENST00000565442 SMPD2O60906 423 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 AK1P00568 194 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 UMPSP11172 480 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 LAMP1P11279 417 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 SDC1P18827 310 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 MAGEA9P43362 315 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 TRPC1P48995 793 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 PAX2Q02962 417 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 TRIP10Q15642 601 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 CDKN3Q16667 212 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 Q1RN00 199 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 SLC25A30Q5SVS4 291 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 RNLSQ5VYX0 342 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 WASH2PQ6VEQ5 465 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
CHD9-215ENST00000565442 LHFPL4Q7Z7J7 247 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 PARGQ86W56 976 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 GCNT2Q8N0V5 402 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 ZBTB44Q8NCP5 570 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 TBCDQ9BTW9 1192 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 FICDQ9BVA6 458 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 TBC1D10AQ9BXI6 508 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 POLE3Q9NRF9 147 aa3.4□□□□□ -1.87
CHD9-215ENST00000565442 METP08581 1390 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 POGZQ7Z3K3 1410 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 A0A087WZY1 265 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 A0A1B0GUL7 405 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 LRRC30A6NM36 301 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 WASHC1A8K0Z3 465 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 SDHDO14521 159 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 OR4F21O95013 312 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 THY1P04216 161 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 SLC35E2P0CK97 266 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 IGFBP5P24593 272 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 DPP4P27487 766 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 AXLP30530 894 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 ACVR1BP36896 505 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 OR1D4P47884 311 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 PLOD1Q02809 727 aaPredicted RBP3.39□□□□□ -1.87
CHD9-215ENST00000565442 IL18R1Q13478 541 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 ZNF239Q16600 458 aaKnown RBP3.39□□□□□ -1.87
CHD9-215ENST00000565442 TTC31Q49AM3 519 aaPredicted RBP3.39□□□□□ -1.87
CHD9-215ENST00000565442 HSP90AA5PQ58FG0 334 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 ATAD3CQ5T2N8 411 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 LGSNQ5TDP6 509 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 GCNT7Q6ZNI0 430 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 UPRTQ96BW1 309 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 DHTKD1Q96HY7 919 aaPredicted RBP3.39□□□□□ -1.87
CHD9-215ENST00000565442 HPDLQ96IR7 371 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 C16orf45Q96MC5 204 aaPredicted RBP3.39□□□□□ -1.87
CHD9-215ENST00000565442 VPS35Q96QK1 796 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 CCT8L2Q96SF2 557 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 HCAR1Q9BXC0 346 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 COQ10BQ9H8M1 238 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 GPN2Q9H9Y4 310 aaPredicted RBP3.39□□□□□ -1.87
CHD9-215ENST00000565442 LPAR2Q9HBW0 351 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 RBM28Q9NW13 759 aaKnown RBP3.39□□□□□ -1.87
CHD9-215ENST00000565442 ELOVL2Q9NXB9 296 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 UTP6Q9NYH9 597 aaKnown RBP3.39□□□□□ -1.87
CHD9-215ENST00000565442 SLC2A6Q9UGQ3 507 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 CHMP2BQ9UQN3 213 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 NAALAD2Q9Y3Q0 740 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 GRIN2DO15399 1336 aa3.39□□□□□ -1.87
CHD9-215ENST00000565442 A0A1W2PQ72 361 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 A8MX80 341 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 TM9SF1O15321 606 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 GJB5O95377 273 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 SLC2A10O95528 541 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 MBD3O95983 291 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 JCHAINP01591 159 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 CT45A10P0DMU9 189 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 THRBP10828 461 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 ANXA3P12429 323 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms